Os06g0217700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0217700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 431.93 | 0.976 | 6.75 | -0.621 | 3.95 | 1.46 | 0.0816 | 11.5 | -1.34 | 21 | 10.83 | 11328 | -- | -- |
| 553.25 | 1.1 | 7.31 | -3.57 | 3.95 | 0.688 | 0.0812 | -- | -2.22 | 21.1 | 0.1064 | 47520 | -- | -- |
| 431.94 | 0.968 | 6.75 | -0.621 | 3.95 | 1.46 | -- | 11.6 | -1.34 | 21 | 10.76 | 11314 | -- | -- |
| 553.27 | 1.1 | 7.31 | -3.57 | 3.95 | 0.689 | -- | -- | -2.22 | 21.1 | -0.3376 | 47520 | -- | -- |
| 1318.99 | 1.69 | 6.64 | -0.624 | -- | 1.81 | -- | 12.3 | -1.42 | -- | 3.007 | 10909 | -- | -- |
| 557.96 | 1.11 | 7.24 | -2.85 | 3.96 | -- | 0.104 | -- | -1.94 | 21.1 | -- | -- | -- | -- |
| 558 | 1.11 | 7.24 | -2.85 | 3.96 | -- | -- | -- | -1.94 | 21.1 | -- | -- | -- | -- |
| 1235.72 | 1.64 | 7.15 | -1.03 | -- | 3.29 | -- | -- | -2.15 | -- | 24.61 | 705 | -- | -- |
| 640.15 | 1.18 | 7.05 | -- | 3.98 | -1.86 | -- | -- | -1.06 | 21.1 | 7.469 | 47520 | -- | -- |
| 1462.61 | 1.79 | 7.13 | -2.84 | -- | -- | -- | -- | -1.96 | -- | -- | -- | -- | -- |
| 772.76 | 1.3 | 7.17 | -- | 3.96 | -- | -- | -- | -1.62 | 21.1 | -- | -- | -- | -- |
| 1393.63 | 1.74 | 7.1 | -- | -- | 3.1 | -- | -- | -1.81 | -- | 24.9 | 684 | -- | -- |
| 1676.1 | 1.91 | 7.06 | -- | -- | -- | -- | -- | -1.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 416.01 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 6 | 419.91 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 9 | 420.93 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 21 | 422.20 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 22 | 422.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 29 | 422.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 36 | 422.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 51 | 424.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 54 | 424.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 56 | 424.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 69 | 424.90 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 72 | 424.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 81 | 425.33 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 86 | 425.47 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 103 | 426.14 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 107 | 426.59 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 125 | 427.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 126 | 427.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 139 | 427.42 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 197 | 428.45 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 221 | 428.92 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 227 | 429.06 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 259 | 429.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 272 | 429.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 303 | 429.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 18 |
| 354 | 430.56 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 357 | 430.58 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 360 | 430.63 | wind | 9.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 365 | 430.67 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 401 | 430.91 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 16 |
| 405 | 430.92 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 14 |
| 407 | 430.93 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 426 | 431.08 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 439 | 431.18 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 441 | 431.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 18 |
| 463 | 431.36 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 505 | 431.58 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 537 | 431.77 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 572 | 432.05 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 14 |
| 591 | 432.15 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 670 | 432.58 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 712 | 432.72 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 764 | 433.03 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 765 | 433.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 939 | 434.00 | wind | 9.0 | 43200 | > th | dose independent | sin | 9 | NA |