Os06g0214900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pyridine nucleotide-disulphide oxidoreductase, class I family protein.
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Os06g0214900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pyridine nucleotide-disulphide oxidoreductase, class I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68 | 0.387 | 9.51 | -0.759 | 0.307 | -0.181 | -0.334 | -2.99 | -0.765 | 13.1 | 0.1957 | 4851 | -- | -- |
| 66.8 | 0.381 | 9.47 | -0.588 | 0.29 | -0.988 | -0.427 | -- | -0.794 | 13.2 | 0.4787 | 13926 | -- | -- |
| 68.4 | 0.385 | 9.51 | -0.787 | 0.312 | -0.174 | -- | -2.94 | -0.769 | 13.2 | 0.2563 | 4897 | -- | -- |
| 66.77 | 0.381 | 9.47 | -0.644 | 0.309 | -1.01 | -- | -- | -0.808 | 13.2 | 0.4753 | 13954 | -- | -- |
| 74.26 | 0.401 | 9.52 | -0.802 | -- | -0.155 | -- | -3.1 | -0.771 | -- | 0.2647 | 4852 | -- | -- |
| 85.69 | 0.434 | 9.45 | -0.975 | 0.334 | -- | -0.209 | -- | -0.724 | 13.1 | -- | -- | -- | -- |
| 85.87 | 0.434 | 9.45 | -0.982 | 0.335 | -- | -- | -- | -0.725 | 13.2 | -- | -- | -- | -- |
| 73.63 | 0.4 | 9.47 | -0.685 | -- | -0.985 | -- | -- | -0.83 | -- | 0.4702 | 13884 | -- | -- |
| 74.09 | 0.401 | 9.46 | -- | 0.34 | -1.05 | -- | -- | -0.786 | 13.3 | 1 | 22855 | -- | -- |
| 92.8 | 0.45 | 9.45 | -0.995 | -- | -- | -- | -- | -0.731 | -- | -- | -- | -- | -- |
| 111.31 | 0.494 | 9.42 | -- | 0.351 | -- | -- | -- | -0.615 | 13.3 | -- | -- | -- | -- |
| 81.39 | 0.42 | 9.47 | -- | -- | -1.07 | -- | -- | -0.795 | -- | 1.001 | 22735 | -- | -- |
| 118.93 | 0.509 | 9.43 | -- | -- | -- | -- | -- | -0.621 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.06 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 2 | 61.16 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 4 | 62.00 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 5 | 62.04 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 6 | 62.06 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 8 | 62.14 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 12 | 62.35 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 24 | 62.71 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 31 | 62.95 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 43 | 63.21 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 44 | 63.26 | wind | 5.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 48 | 63.30 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 78 | 63.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 91 | 64.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 92 | 64.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 93 | 64.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 117 | 64.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 118 | 64.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 119 | 64.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 121 | 64.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 122 | 64.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 124 | 64.57 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 129 | 64.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 147 | 64.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 156 | 64.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 13 |
| 163 | 64.99 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 171 | 65.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 19 |
| 176 | 65.05 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 184 | 65.08 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 185 | 65.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 187 | 65.09 | temperature | 20.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 199 | 65.21 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 200 | 65.22 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 201 | 65.22 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 202 | 65.23 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 211 | 65.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 212 | 65.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 213 | 65.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 217 | 65.31 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 220 | 65.32 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 227 | 65.35 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 229 | 65.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 230 | 65.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 233 | 65.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 244 | 65.44 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 263 | 65.49 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 274 | 65.52 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 286 | 65.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 334 | 65.66 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 338 | 65.67 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 339 | 65.67 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 355 | 65.71 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 361 | 65.73 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 376 | 65.77 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 382 | 65.77 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 403 | 65.82 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 22 | NA |
| 408 | 65.83 | temperature | 20.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 414 | 65.83 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 431 | 65.87 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 439 | 65.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 444 | 65.90 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 451 | 65.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 454 | 65.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 493 | 66.01 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 556 | 66.13 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 609 | 66.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 665 | 66.31 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 666 | 66.31 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 668 | 66.31 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 669 | 66.31 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 703 | 66.36 | wind | 5.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 766 | 66.48 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 808 | 66.55 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 815 | 66.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 17 |
| 816 | 66.57 | wind | 5.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 926 | 66.74 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 927 | 66.74 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |