BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0214900 Os06g0214900|AK064752
         (548 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08740.1  | chr5:2848752-2851323 REVERSE LENGTH=520            628   e-180
AT2G29990.1  | chr2:12793562-12795913 REVERSE LENGTH=509           64   2e-10

>AT5G08740.1 | chr5:2848752-2851323 REVERSE LENGTH=520
          Length = 519

 Score =  628 bits (1619), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 308/485 (63%), Positives = 379/485 (78%), Gaps = 18/485 (3%)

Query: 63  MASSSSGDGGFSRPSSTDEGPMPIYSWPDKQRPRVCILGGGFGGLYTALRLESLVWPNDK 122
           ++ + + + G +  S  +  P   YSWPD +RPRVCILGGGFGGLYTALRLESLVWP DK
Sbjct: 50  LSRAVTNNSGTTEISDNETAPR-TYSWPDNKRPRVCILGGGFGGLYTALRLESLVWPEDK 108

Query: 123 KPQVMLVDQSDRFVFKPMLYELLSGEVDVWEIAPSFTELLKNTSVQFVKDSVKLLRPSDH 182
           KPQV+LVDQS+RFVFKPMLYELLSGEVDVWEIAP F++LL NT +QF++D VK L P DH
Sbjct: 109 KPQVVLVDQSERFVFKPMLYELLSGEVDVWEIAPRFSDLLTNTGIQFLRDRVKTLLPCDH 168

Query: 183 FRRD-SGGSCTGGVVHLESGTVIEYDWLVLALGAEAKIDVVPGSAEYAIPFTTLDDALKV 241
              + S  S TGG V LESG  IEYDWLVLALGAE+K+DVVPG+ E A PF TL+DA++V
Sbjct: 169 LGVNGSEISVTGGTVLLESGFKIEYDWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRV 228

Query: 242 ESQLKMLERRRFGKNSPDIQVAIVGLGYSGVELAATISERLKNKGIVQAINVQTTICPSA 301
             +L  LER+ F K+   I+VA+VG GY+GVELAATISERL+++GIVQ+INV   I  SA
Sbjct: 229 NEKLSKLERKNF-KDGSAIKVAVVGCGYAGVELAATISERLQDRGIVQSINVSKNILTSA 287

Query: 302 PPGNRDAALKVLESRNIQLFLGYFVNCIREASASEDSSSMVTDAKEVNGDHKKLLLELQP 361
           P GNR+AA+KVL SR +QL LGY V  I+ AS  E+               +   LELQP
Sbjct: 288 PDGNREAAMKVLTSRKVQLLLGYLVQSIKRASNLEE--------------DEGYFLELQP 333

Query: 362 AQRGIQSQVLEADMVLWTVGSTSQIPRLQPPDAPYVIPLNGRGQVETEETLQVKGHPRTF 421
           A+RG++SQ++EAD+VLWTVG+   + +L+P   P V+PLN RGQ ET+ETL+VKGHPR F
Sbjct: 334 AERGLESQIIEADIVLWTVGAKPLLTKLEP-SGPNVLPLNARGQAETDETLRVKGHPRIF 392

Query: 422 AIGDSAALRDPSGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRS 481
           A+GDS++LRD +GK+LP TAQVAFQ+ADF GWN+WAAIN+RPLLPFRFQNLGEMMTLGR 
Sbjct: 393 ALGDSSSLRDSNGKILPTTAQVAFQEADFTGWNIWAAINNRPLLPFRFQNLGEMMTLGRY 452

Query: 482 DAAITASFIEGLTLEGPLGHAARKIVYCLRMPTDEHRVKVGISWFTKTAVDSLASLQNAV 541
           DAAI+ SFIEGLTLEGP+GHAARK+ Y +R+PTDEHR  V ISWF K+AVDS+A LQ+ +
Sbjct: 453 DAAISPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRFMVRISWFAKSAVDSIALLQSNL 512

Query: 542 SSMLT 546
           + +L+
Sbjct: 513 TKVLS 517



>AT2G29990.1 | chr2:12793562-12795913 REVERSE LENGTH=509
          Length = 508

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 203/481 (42%), Gaps = 99/481 (20%)

Query: 93  QRPRVCILGGGFGGLYTALRLESLVWPNDKKPQVMLVDQSDRFVFKPMLYELLSGEVDVW 152
           ++PRV +LG G+ G      +++ ++       V+ V   +  VF P+L     G ++  
Sbjct: 70  EKPRVVVLGSGWAGCRLMKGIDTNLY------DVVCVSPRNHMVFTPLLASTCVGTLEFR 123

Query: 153 EIAPSFTELLKNTSVQ-----FVKDSVKLLRPSDHFRRDSGGSCTGGVVHLESGTV-IEY 206
            +A   + +    S +     F+ +  +L   +     ++    T G+  L+     I Y
Sbjct: 124 SVAEPISRIQPAISREPGSFFFLANCSRLDADAHEVHCET---LTDGLNTLKPWKFKIAY 180

Query: 207 DWLVLALGAEAKIDVVPGSAEYAIPFTTLDDALKVESQLKM------------LERRRFG 254
           D LV+A GAEA    + G  E AI    +  A ++  +L +             E+RR  
Sbjct: 181 DKLVIASGAEASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRL- 239

Query: 255 KNSPDIQVAIVGLGYSGVELAATISERLKNKGIVQAINVQTTICPSAPPGNRDAALKVLE 314
                +   +VG G +GVE +  +S+ +      +  +V+            D  + ++E
Sbjct: 240 -----LHCVVVGGGPTGVEFSGELSDFIMKDVRQRYAHVKD-----------DIHVTLIE 283

Query: 315 SRNIQLFLGYFVNCIREASASEDSSSMVTDAKEVNGDHKKLLLELQPAQRGIQSQVLEAD 374
           +R+I   L  F + +R  +  + + S V   + +  D              +QSQ L  D
Sbjct: 284 ARDI---LSSFDDRLRRYAIKQLNKSGVRFVRGIVKD--------------VQSQKLILD 326

Query: 375 --------MVLWTVGSTSQIPRLQPPDAPYV----IPLNGRGQVETEETLQVKGHPRTFA 422
                   +++W+ G       + P  +P+V    +P +  G++  +E ++V      FA
Sbjct: 327 DGTEVPYGLLVWSTG-------VGP--SPFVRSLGLPKDPTGRIGIDEWMRVPSVQDVFA 377

Query: 423 IGDSAALRDPSGK-LLPATAQVAFQQADFAGWNLWAAIND------------RPLLPFRF 469
           IGD +   + +GK  LPA AQVA ++  +   NL  AI                 +PF +
Sbjct: 378 IGDCSGYLETTGKPTLPALAQVAEREGKYLA-NLLNAIGKGNGGRANSAKEIELGVPFVY 436

Query: 470 QNLGEMMTLGRSDAAI---TASFIEGLTLEGPLGHAARKIVYCLRMPTDEHRVKVGISWF 526
           ++LG M T+GR  A +    +   +G+++ G +     +  Y  R+ +  +R  V I+WF
Sbjct: 437 KHLGSMATIGRYKALVDLRESKDAKGISMTGFVSWFIWRSAYLTRVISWRNRFYVAINWF 496

Query: 527 T 527
           T
Sbjct: 497 T 497



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,505,978
Number of extensions: 489502
Number of successful extensions: 1249
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1241
Number of HSP's successfully gapped: 5
Length of query: 548
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 445
Effective length of database: 8,282,721
Effective search space: 3685810845
Effective search space used: 3685810845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)