Os06g0207700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0207700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.86 | 0.328 | 9.41 | 1.03 | 0.929 | 0.491 | 0.335 | 1.35 | 0.395 | 6.5 | 66 | 2757 | -- | -- |
| 51.19 | 0.333 | 9.4 | 1.08 | 0.913 | 0.613 | 0.301 | -- | 0.413 | 6.39 | 66.22 | 2631 | -- | -- |
| 49.03 | 0.326 | 9.42 | 1.07 | 0.926 | 0.477 | -- | 1.44 | 0.379 | 6.53 | 64.33 | 2767 | -- | -- |
| 51.43 | 0.334 | 9.4 | 1.09 | 0.917 | 0.608 | -- | -- | 0.412 | 6.4 | 66.61 | 2631 | -- | -- |
| 56.72 | 0.351 | 9.4 | 1.08 | -- | 1.02 | -- | 0.732 | 0.51 | -- | 73.6 | 589 | -- | -- |
| 62.22 | 0.37 | 9.38 | 1.03 | 0.917 | -- | 0.289 | -- | 0.5 | 6.8 | -- | -- | -- | -- |
| 62.43 | 0.37 | 9.38 | 1.04 | 0.918 | -- | -- | -- | 0.499 | 6.8 | -- | -- | -- | -- |
| 57.78 | 0.354 | 9.39 | 1.15 | -- | 1.09 | -- | -- | 0.557 | -- | 72.89 | 576 | -- | -- |
| 59.25 | 0.359 | 9.4 | -- | 0.87 | 1.3 | -- | -- | 0.401 | 6.94 | 63.99 | 27690 | -- | -- |
| 106.54 | 0.482 | 9.4 | 1.06 | -- | -- | -- | -- | 0.517 | -- | -- | -- | -- | -- |
| 90.76 | 0.446 | 9.4 | -- | 0.931 | -- | -- | -- | 0.384 | 6.73 | -- | -- | -- | -- |
| 91.61 | 0.446 | 9.41 | -- | -- | 0.983 | -- | -- | 0.472 | -- | 75 | 567 | -- | -- |
| 136.01 | 0.544 | 9.42 | -- | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.16 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 3 | 49.19 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 7 | 49.28 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 8 | 49.29 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 13 | 49.29 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 22 | 49.31 | humidity | 60 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 25 | 49.34 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 28 | 49.34 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 16 |
| 37 | 49.35 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 38 | 49.35 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 43 | 49.35 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 45 | 49.36 | humidity | 60 | 14400 | > th | dose independent | sin | 22 | NA |
| 47 | 49.36 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 142 | 49.38 | humidity | 60 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 167 | 49.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 180 | 49.41 | humidity | 60 | 14400 | < th | dose independent | sin | 18 | NA |
| 215 | 49.43 | humidity | 70 | 14400 | < th | dose dependent | sin | 11 | NA |
| 243 | 49.47 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 245 | 49.47 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 251 | 49.48 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 261 | 49.48 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 268 | 49.48 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 274 | 49.49 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 283 | 49.51 | humidity | 50 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 299 | 49.52 | humidity | 60 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 310 | 49.53 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 353 | 49.55 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |
| 474 | 49.65 | humidity | 70 | 14400 | < th | dose dependent | rect. | 9 | 10 |
| 516 | 49.69 | humidity | 70 | 14400 | < th | dose dependent | sin | 18 | NA |
| 607 | 49.76 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |
| 676 | 49.81 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 693 | 49.84 | humidity | 70 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 807 | 49.91 | humidity | 50 | 14400 | > th | dose independent | sin | 12 | NA |
| 860 | 49.99 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 884 | 50.04 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 895 | 50.05 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 896 | 50.05 | temperature | 25 | 10 | > th | dose independent | rect. | 16 | 4 |
| 971 | 50.14 | humidity | 70 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 975 | 50.15 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 1 |