Os06g0199800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : cAMP-type GPCR family protein.
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Os06g0199800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : cAMP-type GPCR family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.56 | 0.255 | 8.65 | 0.531 | 0.505 | 0.262 | 0.0551 | 0.408 | 0.312 | 23.8 | 70.31 | 1491 | -- | -- |
| 29.81 | 0.254 | 8.64 | 0.57 | 0.49 | 0.312 | 0.0994 | -- | 0.326 | 23.6 | 70 | 1591 | -- | -- |
| 29.57 | 0.253 | 8.65 | 0.529 | 0.504 | 0.262 | -- | 0.415 | 0.311 | 23.8 | 70.28 | 1495 | -- | -- |
| 29.83 | 0.254 | 8.64 | 0.587 | 0.487 | 0.312 | -- | -- | 0.33 | 23.6 | 70.04 | 1591 | -- | -- |
| 43.62 | 0.309 | 8.64 | 0.554 | -- | 0.247 | -- | 0.0911 | 0.283 | -- | 70.28 | 1495 | -- | -- |
| 32.78 | 0.268 | 8.65 | 0.53 | 0.51 | -- | 0.0252 | -- | 0.291 | 23.8 | -- | -- | -- | -- |
| 32.78 | 0.268 | 8.65 | 0.529 | 0.51 | -- | -- | -- | 0.291 | 23.8 | -- | -- | -- | -- |
| 43.66 | 0.309 | 8.64 | 0.557 | -- | 0.247 | -- | -- | 0.284 | -- | 70.28 | 1495 | -- | -- |
| 38.7 | 0.29 | 8.65 | -- | 0.542 | 0.284 | -- | -- | 0.267 | 23.6 | 70.78 | 3518 | -- | -- |
| 49.17 | 0.328 | 8.64 | 0.545 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 40.17 | 0.296 | 8.66 | -- | 0.517 | -- | -- | -- | 0.232 | 23.9 | -- | -- | -- | -- |
| 49.25 | 0.327 | 8.66 | -- | -- | 0.536 | -- | -- | 0.206 | -- | 63.74 | 47520 | -- | -- |
| 56.99 | 0.352 | 8.65 | -- | -- | -- | -- | -- | 0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.04 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 2 | 28.06 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 4 | 28.10 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 5 | 28.10 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 7 | 28.17 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 11 | 28.21 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 16 | 28.30 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 11 |
| 42 | 28.53 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 44 | 28.55 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 47 | 28.55 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 52 | 28.57 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 63 | 28.65 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 68 | 28.69 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 80 | 28.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 84 | 28.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 93 | 28.81 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 95 | 28.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 112 | 28.85 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 115 | 28.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 148 | 28.92 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 159 | 28.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 161 | 28.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 163 | 28.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 172 | 28.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 185 | 28.95 | humidity | 90.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 188 | 28.95 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 204 | 28.96 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 206 | 28.96 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 208 | 28.96 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 211 | 28.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 219 | 28.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 223 | 28.97 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 260 | 29.00 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 261 | 29.00 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 271 | 29.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 281 | 29.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 290 | 29.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 294 | 29.02 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 317 | 29.04 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 337 | 29.05 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 374 | 29.08 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 379 | 29.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 411 | 29.10 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 425 | 29.11 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 428 | 29.11 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 433 | 29.12 | humidity | 90.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 445 | 29.12 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 453 | 29.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 506 | 29.15 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 521 | 29.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 17 |
| 528 | 29.16 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 539 | 29.16 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 12 |
| 548 | 29.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 562 | 29.17 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 575 | 29.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 588 | 29.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 598 | 29.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 606 | 29.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 642 | 29.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 663 | 29.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 665 | 29.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 674 | 29.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 769 | 29.25 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 797 | 29.26 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 12 |
| 800 | 29.26 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 878 | 29.28 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 882 | 29.28 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 913 | 29.29 | humidity | 70.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 914 | 29.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 919 | 29.29 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 938 | 29.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 9 |