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Os06g0199200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ataxin-2, C-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0169) R2 : 0.497
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.923 (0.0436) R2dC : 0.496 R2C : 0.491
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0702 (0.0357) R2dN8 : 0.00552 R2N8 : 0.00116
σ : 0.32
deviance : 46.66
__
_____
C
peak time of C : 4.32
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.34 0.212 13.1 -0.261 0.915 -0.241 0.484 3.45 -0.0303 4.24 26.66 1993 -- --
21.72 0.217 13.2 -0.935 0.925 0.163 0.407 -- -0.139 4.23 32.44 3660 -- --
20.83 0.213 13.1 -0.156 0.914 -0.247 -- 3.52 -0.0148 4.28 27.09 2613 -- --
22.02 0.219 13.2 -0.976 0.931 0.148 -- -- -0.153 4.3 31.69 5635 -- --
58.06 0.357 13.2 -0.715 -- -0.903 -- 1.23 -0.124 -- 26.83 2675 -- --
22.59 0.223 13.2 -0.941 0.937 -- 0.442 -- -0.173 4.26 -- -- -- --
23.13 0.225 13.2 -0.945 0.941 -- -- -- -0.175 4.3 -- -- -- --
55.84 0.35 13.2 -0.803 -- -0.834 -- -- -0.125 -- 26.04 11216 -- --
34.53 0.274 13.2 -- 0.918 -0.454 -- -- -0.144 4.29 35.39 47520 -- --
70.8 0.393 13.2 -0.907 -- -- -- -- -0.15 -- -- -- -- --
46.66 0.32 13.2 -- 0.923 -- -- -- -0.0702 4.32 -- -- -- --
71.68 0.396 13.2 -- -- -1.17 -- -- 0.0821 -- 6.607 46508 -- --
92.52 0.449 13.2 -- -- -- -- -- -0.0498 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.79 temperature 25.0 10 > th dose dependent rect. 16 16
2 20.01 temperature 25.0 10 > th dose dependent rect. 18 14
3 20.04 radiation 10.0 720 < th dose independent rect. 5 2
8 20.19 atmosphere 995.0 720 > th dose independent rect. 12 5
9 20.22 radiation 40.0 720 < th dose dependent rect. 5 2
12 20.25 temperature 25.0 10 > th dose dependent sin 11 NA
13 20.26 temperature 10.0 720 > th dose dependent rect. 5 2
14 20.27 temperature 10.0 90 > th dose dependent rect. 17 12
15 20.30 radiation 20.0 720 < th dose independent rect. 22 9
19 20.31 atmosphere 995.0 720 > th dose independent rect. 5 11
22 20.34 atmosphere 995.0 720 > th dose independent rect. 19 22
23 20.35 temperature 15.0 720 > th dose independent rect. 5 2
24 20.35 wind 7.0 90 < th dose independent rect. 5 12
25 20.36 atmosphere 995.0 720 > th dose independent rect. 4 13
26 20.36 radiation 1.0 720 < th dose dependent rect. 24 6
27 20.37 wind 9.0 720 < th dose independent rect. 17 2
30 20.38 atmosphere 995.0 720 > th dose independent rect. 5 19
33 20.40 wind 7.0 720 < th dose independent rect. 23 6
36 20.40 temperature 10.0 10 > th dose dependent rect. 18 12
41 20.42 radiation 40.0 720 < th dose dependent rect. 22 9
45 20.43 humidity 70.0 720 > th dose independent rect. 5 2
47 20.43 wind 1.0 270 > th dose independent rect. 16 12
48 20.43 atmosphere 1010.0 10 < th dose independent rect. 6 12
50 20.43 temperature 10.0 90 > th dose dependent rect. 5 12
51 20.44 wind 7.0 720 < th dose independent rect. 5 2
54 20.44 temperature 10.0 720 > th dose independent rect. 17 2
56 20.44 temperature 30.0 720 < th dose independent rect. 5 2
57 20.44 humidity 50.0 720 > th dose independent rect. 5 2
59 20.44 atmosphere 995.0 720 > th dose independent rect. 5 2
60 20.44 atmosphere 1015.0 720 < th dose independent rect. 5 2
61 20.44 atmosphere 1015.0 720 < th dose independent rect. 17 2
64 20.44 radiation 20.0 720 < th dose independent rect. 17 2
67 20.44 wind 7.0 90 < th dose independent rect. 17 12
68 20.44 temperature 10.0 720 > th dose independent rect. 7 22
69 20.44 temperature 10.0 720 > th dose independent rect. 19 22
76 20.46 humidity 50.0 720 > th dose independent rect. 19 15
77 20.46 wind 9.0 720 < th dose independent rect. 17 18
78 20.46 radiation 40.0 90 < th dose independent rect. 17 20
80 20.47 humidity 70.0 720 > th dose independent rect. 22 9
81 20.48 precipitation 0.1 720 < th dose independent rect. 5 2
84 20.48 precipitation 0.1 720 < th dose dependent rect. 5 2
87 20.49 temperature 10.0 720 > th dose independent rect. 22 9
88 20.49 temperature 30.0 720 < th dose independent rect. 22 9
89 20.49 humidity 50.0 720 > th dose independent rect. 22 9
91 20.49 atmosphere 995.0 720 > th dose independent rect. 22 9
95 20.49 temperature 10.0 720 > th dose independent rect. 7 15
96 20.49 wind 9.0 720 < th dose independent rect. 7 22
99 20.50 precipitation 0.1 720 < th dose independent rect. 12 5
100 20.50 wind 9.0 720 < th dose independent rect. 22 9
102 20.50 precipitation 0.1 720 < th dose dependent rect. 12 5
105 20.51 precipitation 0.1 720 < th dose independent rect. 24 5
106 20.51 temperature 10.0 720 > th dose independent rect. 10 9
107 20.51 atmosphere 1015.0 720 < th dose independent rect. 10 9
110 20.51 temperature 10.0 720 > th dose independent rect. 19 15
111 20.51 atmosphere 995.0 720 > th dose independent rect. 19 15
112 20.51 precipitation 0.1 720 < th dose dependent rect. 24 5
114 20.52 temperature 25.0 90 < th dose independent rect. 10 1
115 20.52 temperature 15.0 90 > th dose independent rect. 5 12
117 20.53 precipitation 0.1 43200 > th dose independent rect. 21 1
118 20.53 precipitation 0.1 43200 < th dose independent rect. 21 1
120 20.53 temperature 10.0 720 > th dose independent rect. 12 5
121 20.53 atmosphere 1015.0 720 < th dose independent rect. 12 5
124 20.53 temperature 10.0 720 > th dose independent rect. 17 19
125 20.53 precipitation 0.1 43200 > th dose dependent rect. 21 1
126 20.53 precipitation 0.1 43200 < th dose dependent rect. 21 1
130 20.54 temperature 10.0 720 > th dose independent rect. 24 5
131 20.54 temperature 30.0 720 < th dose independent rect. 24 5
132 20.54 humidity 50.0 720 > th dose independent rect. 24 5
135 20.54 atmosphere 995.0 720 > th dose independent rect. 24 5
136 20.54 radiation 20.0 720 < th dose independent rect. 24 5
141 20.54 atmosphere 1010.0 90 < th dose independent rect. 5 12
144 20.54 temperature 10.0 720 > th dose independent rect. 5 19
146 20.54 radiation 20.0 720 < th dose dependent rect. 24 5
149 20.55 temperature 25.0 270 < th dose independent rect. 8 4
153 20.55 atmosphere 995.0 270 > th dose independent rect. 12 12
154 20.55 temperature 10.0 720 > th dose dependent rect. 17 2
172 20.56 precipitation 0.1 270 < th dose independent rect. 12 12
175 20.56 temperature 25.0 4320 > th dose dependent rect. 16 1
182 20.56 precipitation 0.1 270 < th dose dependent rect. 12 12
183 20.56 radiation 10.0 10 < th dose dependent rect. 18 13
184 20.57 wind 1.0 90 > th dose independent rect. 17 6
186 20.57 temperature 25.0 1440 > th dose dependent rect. 16 5
192 20.57 temperature 25.0 1440 > th dose dependent rect. 16 16
196 20.58 temperature 15.0 90 > th dose independent rect. 17 12
199 20.58 temperature 25.0 1440 > th dose dependent rect. 16 3
206 20.59 wind 1.0 10 > th dose independent rect. 18 4
207 20.59 atmosphere 995.0 90 > th dose independent rect. 5 12
209 20.59 wind 9.0 720 < th dose independent rect. 19 15
212 20.59 atmosphere 1015.0 10 < th dose dependent rect. 18 4
222 20.60 radiation 20.0 90 < th dose independent rect. 17 12
226 20.60 radiation 40.0 720 < th dose independent rect. 19 14
228 20.60 humidity 50.0 720 > th dose dependent rect. 5 2
229 20.60 temperature 10.0 90 > th dose dependent rect. 17 5
230 20.60 atmosphere 1015.0 90 < th dose dependent rect. 17 5
235 20.61 wind 1.0 720 > th dose independent rect. 17 2
239 20.61 precipitation 0.1 270 < th dose independent rect. 1 11
243 20.61 radiation 20.0 30 < th dose independent rect. 5 23
245 20.61 atmosphere 1015.0 270 < th dose dependent rect. 17 2
249 20.61 precipitation 0.1 270 < th dose dependent rect. 1 11
253 20.62 radiation 40.0 14400 < th dose independent rect. 14 18
255 20.62 radiation 30.0 14400 > th dose dependent rect. 7 1
275 20.63 wind 9.0 720 < th dose independent rect. 17 10
276 20.63 temperature 10.0 270 > th dose independent rect. 1 11
277 20.63 atmosphere 995.0 270 > th dose independent rect. 1 11
278 20.63 atmosphere 1015.0 270 < th dose independent rect. 1 11
280 20.63 temperature 10.0 270 > th dose independent rect. 12 12
284 20.63 wind 9.0 720 < th dose independent rect. 16 13
293 20.63 temperature 25.0 10 > th dose dependent rect. 21 11
314 20.65 radiation 40.0 10 < th dose independent rect. 18 18
315 20.65 temperature 25.0 1440 > th dose dependent sin 13 NA
333 20.66 temperature 25.0 4320 > th dose independent rect. 5 1
334 20.66 radiation 40.0 14400 < th dose independent rect. 14 1
346 20.66 precipitation 0.1 90 < th dose independent rect. 5 12
347 20.66 temperature 15.0 720 > th dose independent rect. 4 13
350 20.66 temperature 30.0 720 < th dose independent rect. 19 14
355 20.66 radiation 40.0 720 < th dose dependent rect. 17 2
357 20.66 temperature 10.0 10 > th dose dependent rect. 18 4
360 20.66 radiation 40.0 90 < th dose dependent rect. 17 12
361 20.66 precipitation 0.1 90 < th dose dependent rect. 5 12
378 20.67 atmosphere 995.0 10 > th dose independent rect. 22 20
382 20.67 temperature 30.0 270 < th dose dependent rect. 8 3
390 20.68 radiation 10.0 14400 < th dose independent rect. 16 1
392 20.68 precipitation 0.1 720 < th dose independent rect. 17 2
396 20.68 precipitation 0.1 720 < th dose dependent rect. 17 2
414 20.69 radiation 40.0 14400 < th dose independent rect. 14 10
415 20.69 temperature 15.0 720 > th dose independent rect. 5 11
430 20.69 temperature 25.0 4320 > th dose dependent rect. 5 1
449 20.70 radiation 30.0 14400 < th dose independent rect. 2 6
450 20.70 radiation 30.0 14400 < th dose independent rect. 24 8
455 20.70 humidity 60.0 90 > th dose independent rect. 13 14
456 20.70 atmosphere 1015.0 720 < th dose independent rect. 3 14
457 20.70 temperature 15.0 10 > th dose independent rect. 22 20
470 20.71 radiation 30.0 14400 < th dose independent rect. 7 1
472 20.71 temperature 25.0 4320 < th dose independent rect. 5 2
476 20.71 radiation 30.0 14400 < th dose independent rect. 4 4
479 20.71 wind 1.0 720 > th dose independent rect. 10 9
483 20.71 wind 9.0 270 < th dose independent rect. 24 12
499 20.72 radiation 40.0 14400 < th dose independent sin 13 NA
500 20.72 temperature 25.0 4320 > th dose independent rect. 17 1
502 20.72 temperature 25.0 4320 < th dose independent rect. 17 1
503 20.72 radiation 30.0 14400 < th dose independent rect. 9 1
510 20.72 atmosphere 1015.0 720 < th dose independent rect. 7 14
511 20.72 radiation 10.0 14400 < th dose independent rect. 16 18
516 20.72 wind 9.0 43200 > th dose dependent rect. 16 2
534 20.73 radiation 30.0 14400 < th dose independent sin 9 NA
537 20.73 radiation 30.0 14400 > th dose independent rect. 7 1
545 20.73 radiation 30.0 14400 < th dose independent rect. 6 5
557 20.73 temperature 10.0 720 > th dose independent rect. 17 11
559 20.73 radiation 20.0 720 < th dose independent rect. 17 11
573 20.73 wind 9.0 720 < th dose independent rect. 7 15
575 20.73 radiation 30.0 14400 < th dose independent rect. 17 15
577 20.73 radiation 20.0 14400 < th dose independent rect. 15 16
581 20.73 atmosphere 995.0 720 > th dose independent rect. 12 19
582 20.73 humidity 60.0 270 > th dose independent rect. 12 20
605 20.74 wind 1.0 43200 > th dose independent rect. 21 1
621 20.74 atmosphere 1015.0 720 < th dose independent rect. 5 11
623 20.74 wind 9.0 270 < th dose independent rect. 12 12
626 20.74 temperature 10.0 720 > th dose independent rect. 16 13
627 20.74 radiation 30.0 720 < th dose independent rect. 16 13
697 20.75 wind 7.0 10 < th dose independent rect. 18 4
710 20.75 wind 9.0 720 < th dose independent rect. 10 9
717 20.75 precipitation 0.1 720 < th dose independent rect. 5 11
719 20.75 radiation 10.0 10 < th dose independent rect. 18 12
732 20.75 precipitation 0.1 720 < th dose independent rect. 17 19
752 20.75 precipitation 0.1 720 < th dose dependent rect. 5 11
760 20.75 precipitation 0.1 720 < th dose dependent rect. 17 19
764 20.75 temperature 25.0 1440 > th dose dependent rect. 16 23
765 20.76 radiation 30.0 14400 < th dose independent sin 5 NA
771 20.76 temperature 10.0 10 > th dose independent rect. 18 4
773 20.76 humidity 50.0 10 > th dose independent rect. 18 4
774 20.76 atmosphere 1010.0 10 < th dose independent rect. 18 4
777 20.76 radiation 10.0 10 < th dose independent rect. 18 4
781 20.76 wind 9.0 720 < th dose independent rect. 12 5
799 20.76 atmosphere 995.0 90 > th dose independent rect. 17 12
830 20.76 wind 9.0 720 < th dose independent rect. 19 22
832 20.76 radiation 40.0 14400 > th dose dependent sin 12 NA
833 20.76 temperature 20.0 720 < th dose dependent rect. 2 1
834 20.76 wind 9.0 720 < th dose dependent rect. 5 2
837 20.76 radiation 30.0 10 < th dose dependent rect. 18 4
857 20.76 radiation 30.0 14400 > th dose dependent rect. 14 18
863 20.76 radiation 40.0 14400 > th dose dependent rect. 12 22
872 20.77 atmosphere 995.0 10 > th dose independent rect. 18 4
886 20.77 wind 9.0 10 < th dose independent rect. 22 20
902 20.77 temperature 25.0 1440 > th dose dependent no NA NA
926 20.77 temperature 10.0 10 > th dose dependent rect. 6 12
929 20.77 atmosphere 1005.0 270 > th dose dependent rect. 24 12
941 20.77 temperature 25.0 1440 > th dose dependent rect. 5 17
994 20.78 precipitation 0.1 720 < th dose independent rect. 4 13