BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0199200 Os06g0199200|AK066664
         (531 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26280.1  | chr2:11188143-11190579 REVERSE LENGTH=568          404   e-113
AT5G58720.1  | chr5:23719976-23722974 REVERSE LENGTH=520           57   3e-08

>AT2G26280.1 | chr2:11188143-11190579 REVERSE LENGTH=568
          Length = 567

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 251/558 (44%), Positives = 328/558 (58%), Gaps = 54/558 (9%)

Query: 20  KVTALNPNAAEFVPSCIR-PSFESSAVSDVSK-ADLRASGKTILDRXXXXXXXXXXXXAH 77
           K T LNP+AAEFVP  +R PS   ++  D    A   + GK +LDR            A 
Sbjct: 18  KPTTLNPHAAEFVPFTLRSPSSGGTSTLDTRLLASSSSVGKAVLDRTESSASHHSDEEAR 77

Query: 78  QFWRKQLPDDIIPDFSFEKIEQEPE---ELSLAGLSLNAPPFYGTTASRF---------- 124
           QFW  QLPDDI PDF     +        LSLA LSL    F G  A +F          
Sbjct: 78  QFWSHQLPDDITPDFGLMTQDDNSYGSGSLSLANLSL----FDGNEAEKFPSASGGYGFS 133

Query: 125 ------SREHDLSSQANKSLELGLTSLLYEDNSQASFPTMGSSNWEQNFVGDLHFTNGNQ 178
                 S   + +S A+KS      S   ED  + SF  +    W++  +       GN 
Sbjct: 134 DQTGLASHNANGNSLADKSRYP--ISSFGEDPQRQSFMQLSPKPWDKQIMNAEQLL-GND 190

Query: 179 GLHYXXXXXXXXXXXXXXXXXXXXXXVLDPLAYLASQFPDFSSESLAELYYANGCDFNHT 238
                                      ++P+ +LASQFP F++ESLAE+Y+ANGCD   T
Sbjct: 191 RERNPFSGKSRHGFVNDMITESPGDMEVNPVDFLASQFPGFAAESLAEVYFANGCDLQLT 250

Query: 239 IEILTQLEMQVDATSNPTLTPRT---PNFSTGDFPALPTVEDQNGFSK--GNADIL---- 289
           IE+LTQLE+QVD   N  ++P+T   P+ +  DFPAL ++ + +G     G  D+     
Sbjct: 251 IEMLTQLELQVDGGLNQNISPKTYAPPSLTPMDFPAL-SISNSHGIPAQFGGDDLQQTGN 309

Query: 290 --------SIFNGRSSPSVST-GTGDFVSAVRKLASQNSGHWKYKKGPEYGNGVSTVSVP 340
                   ++F  +S PSVS  G  D+VSAVRKLASQ+SG WKY++     + + +    
Sbjct: 310 HYQSPEKDNMFFFKSGPSVSQPGAIDYVSAVRKLASQDSGMWKYERNDSADSSIGSSRNS 369

Query: 341 KQYSSTT-KTSSGNKFQSVSSARAAP-WLETGDAVANMYSESRGEARDFARIRNACFEQA 398
             Y S   ++   +K QS +  R AP W+ETGDAV NMYSE R EARD+AR+RN  FEQA
Sbjct: 370 GAYKSGRGRSIYSDKLQSRAQTRPAPVWVETGDAVGNMYSELREEARDYARLRNVYFEQA 429

Query: 399 RQAYLIGNKALAKELSMKGQTYNTQMKASHEKAREAIYRQRNPSSQ---RGSDRLIDLHG 455
           RQAYL+GNKALAKELS+KGQ +N QMKA+H KA+EAIYRQRNP  Q   RG++R+IDLHG
Sbjct: 430 RQAYLVGNKALAKELSVKGQLHNMQMKAAHGKAQEAIYRQRNPVGQGNSRGNERMIDLHG 489

Query: 456 LHVNEAIHILKVELGTLKSTARATGERMQVMICVGTGHHTKGSRT-ARLPIAVEQFLL-E 513
           LHV+EA+ +LK EL  L+STARAT ER+Q+ ICVGTGHHT+GSRT ARLP+AV+++LL E
Sbjct: 490 LHVSEALQVLKHELSVLRSTARATQERLQIYICVGTGHHTRGSRTPARLPVAVQRYLLEE 549

Query: 514 EGLHYTQAQPGLLRVVVF 531
           EGL Y++ Q GLLRV+++
Sbjct: 550 EGLDYSEPQAGLLRVIIY 567



>AT5G58720.1 | chr5:23719976-23722974 REVERSE LENGTH=520
          Length = 519

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 12/154 (7%)

Query: 377 YSESRGEARDFARIRNACFEQARQAYLIGNKALAKELSMKGQTYNTQMKASHEKAREAIY 436
           Y E R  A D   +  + +++A +AY  G +A A  LS KG+  + Q + + E+A + I+
Sbjct: 356 YHELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASKQAQRADERASQDIF 415

Query: 437 RQRNPSSQRGSDRL--IDLHGLHVNEAIHILKVELGTLKSTARATGERMQVMICVGTGHH 494
             RN    +G + +  IDLHG HV  A+ +LK+ L  L  +   + + ++V+    TG  
Sbjct: 416 VARN----KGIENVVTIDLHGQHVKPAMKLLKLHL--LFGSYVPSIQTLRVI----TGCG 465

Query: 495 TKGSRTARLPIAVEQFLLEEGLHYTQAQPGLLRV 528
             G   +++  +V + L  EG+ Y +   G L +
Sbjct: 466 ASGFGKSKVKQSVVKLLEREGVRYCEENRGTLLI 499



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.128    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,570,082
Number of extensions: 413081
Number of successful extensions: 883
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 875
Number of HSP's successfully gapped: 2
Length of query: 531
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 428
Effective length of database: 8,282,721
Effective search space: 3545004588
Effective search space used: 3545004588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)