Os06g0198500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF985 family protein.
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Os06g0198500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF985 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.93 | 0.689 | 7.97 | 0.464 | 4.42 | -4.99 | -0.618 | -0.381 | 0.00494 | 11.4 | 28.7 | 10 | 21.1 | -- |
| 215.1 | 0.683 | 7.98 | 0.45 | 4.41 | -4.97 | -0.646 | -- | 0.000345 | 11.4 | 28.62 | 10 | 21 | -- |
| 216.3 | 0.685 | 7.98 | 0.483 | 4.42 | -4.99 | -- | -0.689 | -0.00496 | 11.4 | 28.62 | 10 | 21 | -- |
| 217.12 | 0.686 | 7.98 | 0.417 | 4.39 | -4.87 | -- | -- | 0.00369 | 11.4 | 28.59 | 10 | 21.1 | -- |
| 409.91 | 0.948 | 8.01 | 0.833 | -- | -5.83 | -- | -1.42 | 0.258 | -- | 38.37 | 2 | 5.12 | -- |
| 430.4 | 0.973 | 7.88 | 1.13 | 4.09 | -- | 0.597 | -- | 0.628 | 12.8 | -- | -- | -- | -- |
| 431.91 | 0.973 | 7.88 | 1.16 | 4.09 | -- | -- | -- | 0.631 | 12.8 | -- | -- | -- | -- |
| 400.41 | 0.932 | 7.98 | 0.928 | -- | -5.19 | -- | -- | 0.399 | -- | 49.96 | 2 | 5.21 | -- |
| 221.42 | 0.693 | 7.99 | -- | 4.41 | -5.05 | -- | -- | -0.0608 | 11.4 | 28.58 | 10 | 21 | -- |
| 1475.75 | 1.8 | 7.95 | 1.01 | -- | -- | -- | -- | 0.555 | -- | -- | -- | -- | -- |
| 467.18 | 1.01 | 7.91 | -- | 4.07 | -- | -- | -- | 0.502 | 12.8 | -- | -- | -- | -- |
| 422.08 | 0.957 | 8.02 | -- | -- | -5.38 | -- | -- | 0.261 | -- | 45.88 | 3 | 5.23 | -- |
| 1502.5 | 1.81 | 7.97 | -- | -- | -- | -- | -- | 0.443 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 220.84 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 5 | 224.39 | temperature | 15 | 10 | > th | dose dependent | sin | 4 | NA |
| 11 | 227.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 13 | 228.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 2 | 15 |
| 17 | 229.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 49 | 237.04 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 65 | 240.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 68 | 240.72 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 81 | 244.48 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 86 | 245.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 129 | 254.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 147 | 255.97 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 222 | 262.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 247 | 263.85 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 279 | 265.87 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 292 | 267.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 297 | 267.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 347 | 270.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 351 | 270.46 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 368 | 271.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 389 | 272.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 433 | 275.74 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 22 |
| 439 | 276.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 468 | 277.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 489 | 278.83 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 20 |
| 510 | 279.93 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 17 |
| 555 | 282.47 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 23 |
| 557 | 282.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 609 | 285.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 615 | 285.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 626 | 285.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 631 | 286.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 671 | 287.95 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 13 |
| 704 | 289.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 719 | 289.92 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 21 |
| 826 | 293.30 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 830 | 293.40 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 23 |
| 854 | 293.98 | radiation | 1 | 270 | < th | dose independent | rect. | 22 | 23 |
| 913 | 296.11 | temperature | 25 | 90 | > th | dose independent | sin | 4 | NA |
| 929 | 296.61 | radiation | 1 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 949 | 297.37 | temperature | 25 | 90 | < th | dose independent | rect. | 21 | 23 |
| 952 | 297.42 | temperature | 25 | 90 | > th | dose independent | no | NA | NA |
| 972 | 297.80 | temperature | 25 | 30 | > th | dose independent | sin | 2 | NA |
| 980 | 298.00 | temperature | 25 | 90 | > th | dose independent | rect. | 20 | 23 |
| 996 | 298.38 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |