Os06g0196600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I).
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Os06g0196600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.42 | 0.237 | 9.89 | 0.196 | 0.293 | -0.934 | 0.269 | -0.135 | 0.252 | 14.8 | 25.21 | 4420 | -- | -- |
| 25.43 | 0.235 | 9.9 | 0.186 | 0.293 | -0.906 | 0.253 | -- | 0.253 | 14.8 | 25.46 | 4420 | -- | -- |
| 25.65 | 0.236 | 9.89 | 0.201 | 0.294 | -0.93 | -- | -0.117 | 0.253 | 14.6 | 25.3 | 4402 | -- | -- |
| 25.51 | 0.235 | 9.89 | 0.288 | 0.321 | -0.831 | -- | -- | 0.29 | 14.5 | 30.58 | 2902 | -- | -- |
| 25.89 | 0.238 | 9.89 | 0.405 | -- | -0.97 | -- | 0.151 | 0.311 | -- | 31.6 | 1767 | -- | -- |
| 38.94 | 0.293 | 9.85 | 0.635 | 0.264 | -- | 0.285 | -- | 0.479 | 14.8 | -- | -- | -- | -- |
| 39.19 | 0.293 | 9.85 | 0.641 | 0.264 | -- | -- | -- | 0.48 | 14.5 | -- | -- | -- | -- |
| 25.92 | 0.238 | 9.88 | 0.428 | -- | -0.959 | -- | -- | 0.316 | -- | 31.3 | 1780 | -- | -- |
| 25.84 | 0.237 | 9.91 | -- | 0.309 | -1.05 | -- | -- | 0.187 | 14.3 | 26.07 | 8158 | -- | -- |
| 43.3 | 0.307 | 9.85 | 0.63 | -- | -- | -- | -- | 0.473 | -- | -- | -- | -- | -- |
| 50.03 | 0.331 | 9.86 | -- | 0.252 | -- | -- | -- | 0.409 | 14.4 | -- | -- | -- | -- |
| 30.47 | 0.258 | 9.9 | -- | -- | -1.08 | -- | -- | 0.252 | -- | 31.3 | 1780 | -- | -- |
| 53.78 | 0.342 | 9.86 | -- | -- | -- | -- | -- | 0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.75 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 23.76 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 242 | 24.71 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 270 | 24.75 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 277 | 24.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 326 | 24.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 407 | 24.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 500 | 25.02 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 590 | 25.10 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 597 | 25.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 607 | 25.12 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 19 |
| 608 | 25.12 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 20 |
| 675 | 25.17 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 676 | 25.17 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 716 | 25.19 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 19 |
| 736 | 25.20 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 19 |
| 804 | 25.23 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 826 | 25.24 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 910 | 25.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 935 | 25.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 958 | 25.29 | wind | 5 | 43200 | < th | dose independent | sin | 14 | NA |