Os06g0190500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0190500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.64 | 0.292 | 10.4 | -0.547 | 1.1 | 0.5 | -0.0797 | -0.446 | 0.0407 | 19.7 | 0.007802 | 30 | -- | -- |
| 39.46 | 0.293 | 10.4 | -0.564 | 1.11 | 0.472 | -0.465 | -- | 0.0502 | 19.8 | 4.341e-06 | 29 | -- | -- |
| 38.66 | 0.29 | 10.4 | -0.546 | 1.1 | 0.499 | -- | -0.475 | 0.0408 | 19.7 | 0.009955 | 29 | -- | -- |
| 40.07 | 0.295 | 10.4 | -0.547 | 1.1 | 0.5 | -- | -- | 0.0375 | 19.7 | 6.62e-07 | 29 | -- | -- |
| 83.14 | 0.427 | 10.4 | -0.544 | -- | 0.876 | -- | -0.619 | 0.0834 | -- | 0.009955 | 29 | -- | -- |
| 43.96 | 0.311 | 10.5 | -0.635 | 1.47 | -- | -0.605 | -- | 0.026 | 21 | -- | -- | -- | -- |
| 45.23 | 0.315 | 10.5 | -0.614 | 1.47 | -- | -- | -- | 0.0265 | 21 | -- | -- | -- | -- |
| 85.61 | 0.433 | 10.4 | -0.565 | -- | 0.872 | -- | -- | 0.0752 | -- | 0.1223 | 18 | -- | -- |
| 48.1 | 0.323 | 10.4 | -- | 1.07 | 0.554 | -- | -- | 0.0844 | 19.5 | 1.161e-05 | 29 | -- | -- |
| 169.82 | 0.609 | 10.4 | -0.611 | -- | -- | -- | -- | 0.0177 | -- | -- | -- | -- | -- |
| 55.17 | 0.347 | 10.4 | -- | 1.47 | -- | -- | -- | 0.0949 | 21 | -- | -- | -- | -- |
| 94.04 | 0.453 | 10.4 | -- | -- | 0.879 | -- | -- | 0.138 | -- | 0.1223 | 18 | -- | -- |
| 179.68 | 0.626 | 10.4 | -- | -- | -- | -- | -- | 0.0855 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.67 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 2 | 33.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 22 | 6 |
| 7 | 34.35 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 9 | 34.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 10 | 34.44 | wind | 7.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 15 | 34.52 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 17 | 34.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 18 | 34.58 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 19 | 34.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 2 |
| 20 | 34.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 21 | 34.60 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 22 | 34.60 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 23 | 34.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 24 | 34.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 27 | 34.62 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 29 | 34.62 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 30 | 34.62 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 32 | 34.62 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 33 | 34.62 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 34 | 34.62 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 35 | 34.62 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 36 | 34.63 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 48 | 34.74 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 50 | 34.75 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 57 | 34.78 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 61 | 34.83 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 93 | 34.86 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 94 | 34.86 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 106 | 34.87 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 112 | 34.90 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 118 | 34.91 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 121 | 34.91 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 122 | 34.92 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 164 | 34.99 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 166 | 35.00 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 170 | 35.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 176 | 35.01 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 177 | 35.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 183 | 35.04 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 184 | 35.04 | radiation | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 185 | 35.04 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 189 | 35.04 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 200 | 35.07 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 202 | 35.07 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 203 | 35.07 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 205 | 35.07 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 206 | 35.07 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 207 | 35.07 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 218 | 35.10 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 219 | 35.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 225 | 35.15 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 261 | 35.19 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 22 | 7 |
| 299 | 35.23 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 22 | 19 |
| 302 | 35.24 | radiation | 1.0 | 10 | < th | dose independent | rect. | 22 | 8 |
| 305 | 35.24 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 320 | 35.26 | wind | 9.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 321 | 35.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 322 | 35.26 | temperature | 30.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 323 | 35.26 | humidity | 50.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 326 | 35.26 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 332 | 35.26 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 334 | 35.26 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 355 | 35.28 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 370 | 35.30 | radiation | 1.0 | 30 | < th | dose dependent | sin | 10 | NA |
| 394 | 35.36 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 396 | 35.36 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 399 | 35.37 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 17 |
| 402 | 35.37 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 456 | 35.42 | wind | 9.0 | 10 | < th | dose dependent | rect. | 22 | 7 |
| 521 | 35.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 522 | 35.51 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 538 | 35.55 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 544 | 35.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 547 | 35.57 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 7 |
| 552 | 35.57 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 556 | 35.57 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 7 |
| 564 | 35.60 | radiation | 1.0 | 10 | > th | dose independent | sin | 9 | NA |
| 578 | 35.60 | radiation | 1.0 | 10 | < th | dose independent | rect. | 22 | 18 |
| 602 | 35.64 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 21 |
| 605 | 35.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 662 | 35.74 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 663 | 35.75 | radiation | 1.0 | 30 | < th | dose independent | sin | 10 | NA |
| 715 | 35.79 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 726 | 35.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 729 | 35.82 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 742 | 35.86 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 756 | 35.89 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 758 | 35.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 759 | 35.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 760 | 35.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 774 | 35.93 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 775 | 35.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 815 | 35.97 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 836 | 36.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 849 | 36.06 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 852 | 36.06 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 853 | 36.06 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 854 | 36.06 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 880 | 36.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 883 | 36.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 921 | 36.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 927 | 36.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 940 | 36.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 959 | 36.24 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 963 | 36.24 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |