Os06g0188600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0188600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.09 | 0.606 | 7.31 | -1.23 | 0.736 | 2.16 | -0.193 | 0.0709 | -0.54 | 2.37 | 20.12 | 4643 | -- | -- |
| 166.1 | 0.6 | 7.31 | -1.24 | 0.735 | 2.16 | -0.191 | -- | -0.543 | 2.35 | 20.12 | 4640 | -- | -- |
| 166.23 | 0.6 | 7.31 | -1.22 | 0.737 | 2.16 | -- | 0.104 | -0.539 | 2.37 | 20.04 | 4643 | -- | -- |
| 166.23 | 0.6 | 7.31 | -1.24 | 0.736 | 2.16 | -- | -- | -0.545 | 2.37 | 20.11 | 4640 | -- | -- |
| 189.59 | 0.641 | 7.3 | -1.18 | -- | 2.42 | -- | 0.499 | -0.551 | -- | 18.79 | 3962 | -- | -- |
| 292.29 | 0.801 | 7.21 | -0.246 | 0.791 | -- | -0.113 | -- | -0.0918 | 2.18 | -- | -- | -- | -- |
| 292.33 | 0.801 | 7.21 | -0.243 | 0.79 | -- | -- | -- | -0.0911 | 2.17 | -- | -- | -- | -- |
| 189.73 | 0.642 | 7.32 | -1.27 | -- | 2.36 | -- | -- | -0.569 | -- | 19.45 | 3973 | -- | -- |
| 193.84 | 0.648 | 7.23 | -- | 0.655 | 1.7 | -- | -- | -0.228 | 2.31 | 22.98 | 4569 | -- | -- |
| 329.63 | 0.848 | 7.2 | -0.21 | -- | -- | -- | -- | -0.0721 | -- | -- | -- | -- | -- |
| 293.89 | 0.802 | 7.21 | -- | 0.786 | -- | -- | -- | -0.064 | 2.17 | -- | -- | -- | -- |
| 218.6 | 0.689 | 7.25 | -- | -- | 1.82 | -- | -- | -0.273 | -- | 22.3 | 4048 | -- | -- |
| 330.8 | 0.849 | 7.2 | -- | -- | -- | -- | -- | -0.0488 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 4 | 164.96 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 5 | 165.07 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 20 | 165.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 17 |
| 30 | 165.70 | temperature | 20 | 4320 | > th | dose dependent | sin | 10 | NA |
| 41 | 165.78 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 44 | 165.80 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 45 | 165.80 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 182 | 166.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 18 |
| 195 | 166.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 249 | 167.05 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 337 | 167.36 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 342 | 167.38 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 398 | 167.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 411 | 167.61 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 536 | 167.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 10 | 19 |
| 540 | 168.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 546 | 168.02 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 672 | 168.24 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 730 | 168.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 786 | 168.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 23 |