BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0188600 Os06g0188600|J090071I05
(98 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48400.2 | chr5:19616244-19619246 FORWARD LENGTH=868 75 5e-15
AT2G29100.1 | chr2:12501092-12504912 REVERSE LENGTH=941 75 8e-15
AT2G29120.1 | chr2:12511479-12515893 REVERSE LENGTH=953 75 9e-15
AT5G48410.1 | chr5:19620316-19623277 FORWARD LENGTH=861 74 1e-14
AT3G07520.1 | chr3:2395121-2398291 REVERSE LENGTH=862 74 1e-14
AT2G29110.1 | chr2:12506880-12510552 REVERSE LENGTH=948 74 2e-14
AT3G51480.1 | chr3:19101256-19104681 FORWARD LENGTH=904 71 1e-13
AT5G11210.1 | chr5:3571214-3574537 REVERSE LENGTH=830 71 1e-13
AT4G31710.1 | chr4:15349121-15352962 FORWARD LENGTH=899 70 3e-13
AT3G04110.1 | chr3:1077361-1080236 FORWARD LENGTH=809 70 3e-13
AT2G32400.1 | chr2:13752665-13756233 REVERSE LENGTH=922 69 7e-13
AT1G05200.1 | chr1:1505642-1509002 FORWARD LENGTH=960 67 1e-12
AT4G35290.2 | chr4:16790290-16793461 FORWARD LENGTH=913 67 2e-12
AT1G42540.1 | chr1:15973489-15976703 FORWARD LENGTH=934 66 3e-12
AT2G24710.1 | chr2:10516880-10520549 REVERSE LENGTH=896 64 1e-11
AT2G17260.1 | chr2:7504780-7508266 FORWARD LENGTH=952 64 2e-11
AT5G27100.1 | chr5:9535160-9538311 REVERSE LENGTH=902 64 2e-11
AT2G24720.1 | chr2:10522783-10525840 REVERSE LENGTH=921 60 3e-10
AT5G11180.1 | chr5:3557261-3561575 REVERSE LENGTH=907 47 2e-06
>AT5G48400.2 | chr5:19616244-19619246 FORWARD LENGTH=868
Length = 867
Score = 75.5 bits (184), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PYT+ GL I+ +K R W+F +PLT LW+ + + F+ +VW+IER N+E+
Sbjct: 535 LPYTEMGLGIVA-----AKERSMWVFFQPLTPNLWITSAAFFVLTGIIVWLIERAENKEF 589
Query: 61 QGSSSRQISTSLYFAFSTMTFSH 83
QGS +QI ++F FST+ ++H
Sbjct: 590 QGSWPQQIGVVIWFGFSTLVYAH 612
>AT2G29100.1 | chr2:12501092-12504912 REVERSE LENGTH=941
Length = 940
Score = 74.7 bits (182), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+P+T+SG+S++V + ++ + W+F++P + +LW+ F++I FVVW+ E N ++
Sbjct: 537 LPFTESGVSMMVPV-RDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDF 595
Query: 61 QGSSSRQISTSLYFAFSTMTFSHGYN 86
+G QI TSL+F+FSTM F+H N
Sbjct: 596 RGPPQYQIGTSLWFSFSTMVFAHREN 621
>AT2G29120.1 | chr2:12511479-12515893 REVERSE LENGTH=953
Length = 952
Score = 74.7 bits (182), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PYT+SG+S++V + W+F++P + LW+ F++I F+VW++E N ++
Sbjct: 555 LPYTESGVSMMV---PLKDNKNTWVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDF 611
Query: 61 QGSSSRQISTSLYFAFSTMTFSH 83
+G QI TS +FAFSTM F+H
Sbjct: 612 RGPPHHQIGTSFWFAFSTMNFAH 634
>AT5G48410.1 | chr5:19620316-19623277 FORWARD LENGTH=861
Length = 860
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+P+T+ GL I+ + E R W+F +PLT LW+ + F+ +VW+IER N+E+
Sbjct: 532 LPFTEMGLGIVAVKE-----RSMWVFFQPLTPDLWITSAFFFVLTGVIVWLIERAENKEF 586
Query: 61 QGSSSRQISTSLYFAFSTMTFSHGYNSHLKH 91
QGS +QI L+F FST+ ++H LKH
Sbjct: 587 QGSWPQQIGVVLWFGFSTLVYAH--REKLKH 615
>AT3G07520.1 | chr3:2395121-2398291 REVERSE LENGTH=862
Length = 861
Score = 73.9 bits (180), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+P+T GL+++ +K + WI KPLT LWL S F+ +VW+IER N ++
Sbjct: 543 LPFTDMGLAVVT-----AKDKSMWIIFKPLTLSLWLTIASFFILTGAIVWLIERHDNADF 597
Query: 61 QGSSSRQISTSLYFAFSTMTFSHGYNSHLKH 91
QGS +QI T L F FST+ F+H L+H
Sbjct: 598 QGSCFQQIGTLLCFGFSTLVFAH--RERLQH 626
>AT2G29110.1 | chr2:12506880-12510552 REVERSE LENGTH=948
Length = 947
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PYT+SG+S++V + ++ + W+F+KP LW+ F+ I FVVW+ E N ++
Sbjct: 548 LPYTESGVSMMVPV-RDNENKNTWVFLKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDF 606
Query: 61 QGSSSRQISTSLYFAFSTMTFSH 83
+G QI TS +F+FSTM F+H
Sbjct: 607 RGPPHHQIGTSFWFSFSTMVFAH 629
>AT3G51480.1 | chr3:19101256-19104681 FORWARD LENGTH=904
Length = 903
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 2 PYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEYQ 61
PY +SGL ++ K + F++P T Q+WL A +SFL + V+W +E N E++
Sbjct: 549 PYVESGLVVVAPVRKLGSSAMA--FLRPFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFR 606
Query: 62 GSSSRQISTSLYFAFSTMTFSH 83
G RQ+ T+ +F+FST+ FSH
Sbjct: 607 GPPRRQVITTFWFSFSTLFFSH 628
>AT5G11210.1 | chr5:3571214-3574537 REVERSE LENGTH=830
Length = 829
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PY+++G+ LV K K + +W+F+KPLT +LWL +SFLYI +VW+ E ++E+
Sbjct: 481 LPYSETGIVFLVPV-KDGKEKGEWVFLKPLTKELWLVTAASFLYIGIMVWIFEYQADEEF 539
Query: 61 QGSS-SRQISTSLYFAFSTMTFSH 83
+ +IS+ YF+FST+ F+H
Sbjct: 540 REQMIIDKISSVFYFSFSTLFFAH 563
>AT4G31710.1 | chr4:15349121-15352962 FORWARD LENGTH=899
Length = 898
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PYT SG+ +V+ K + R IF KPLT LW + SF + FVVW++E N E+
Sbjct: 552 LPYTTSGVG-MVVPLKDNVARSSLIFFKPLTPGLWGMTLGSFFVVGFVVWILEHRVNSEF 610
Query: 61 QGSSSRQISTSLYFAFSTMTFS 82
G QIST +FAFS M F+
Sbjct: 611 TGPPQYQISTMFWFAFSIMVFA 632
>AT3G04110.1 | chr3:1077361-1080236 FORWARD LENGTH=809
Length = 808
Score = 69.7 bits (169), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PYT G+ IL + +K + W F P LWLA+ + F+ VVW++ER N E+
Sbjct: 513 LPYTDIGIGILTVKKK---SQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVNPEF 569
Query: 61 QGSSSRQISTSLYFAFSTMTFSH 83
QGS +Q+S L+F FST+ F+H
Sbjct: 570 QGSWGQQLSMMLWFGFSTIVFAH 592
>AT2G32400.1 | chr2:13752665-13756233 REVERSE LENGTH=922
Length = 921
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 2 PYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEYQ 61
PY +GL +++ A + WIF++P T +LW + SFL IA V+W++E N++++
Sbjct: 552 PYASTGLVVVIPA---NDDNATWIFLRPFTSRLWCVVLVSFLVIAVVIWILEHRINEDFR 608
Query: 62 GSSSRQISTSLYFAFSTM 79
G RQ+ST L F+FST+
Sbjct: 609 GPPRRQLSTMLLFSFSTL 626
>AT1G05200.1 | chr1:1505642-1509002 FORWARD LENGTH=960
Length = 959
Score = 67.4 bits (163), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 2 PYTQSGLSILV-LAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
P+ +SGL ++ + E S P W F+KP T ++W FL++ +VW++E NQE+
Sbjct: 586 PFIESGLVVVAPVKEAKSSP---WSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEF 642
Query: 61 QGSSSRQISTSLYFAFSTMTFSHGYNS 87
+G RQ+ T +F+FSTM FSH N+
Sbjct: 643 RGPPRRQLITIFWFSFSTMFFSHRENT 669
>AT4G35290.2 | chr4:16790290-16793461 FORWARD LENGTH=913
Length = 912
Score = 66.6 bits (161), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 2 PYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEYQ 61
PY +SGL ++ K + W F++P T +W + FL + V+W++E N E++
Sbjct: 560 PYIESGLVVVAPVTKLND--TPWAFLRPFTPPMWAVTAAFFLIVGSVIWILEHRINDEFR 617
Query: 62 GSSSRQISTSLYFAFSTMTFSHGYN--SHLKHADLFI 96
G +QI T L+F+FSTM FSH N S L A L I
Sbjct: 618 GPPRKQIVTILWFSFSTMFFSHRENTVSTLGRAVLLI 654
>AT1G42540.1 | chr1:15973489-15976703 FORWARD LENGTH=934
Length = 933
Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 2 PYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEYQ 61
PY SGL ++ +K + W F++P +W FL++ VVW++E N E++
Sbjct: 559 PYAASGLVVVAPFKKLNSG--AWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFR 616
Query: 62 GSSSRQISTSLYFAFSTMTFSHGYNS 87
G RQ T L+F+FSTM F+H N+
Sbjct: 617 GPPKRQCVTILWFSFSTMFFAHRENT 642
>AT2G24710.1 | chr2:10516880-10520549 REVERSE LENGTH=896
Length = 895
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 2 PYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEYQ 61
P+ +SG+ ++V K R +F+KPL+W+LWL + SF + VW++E RN ++
Sbjct: 552 PFIKSGVGLIVEMTDPVK-RDYILFMKPLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFS 610
Query: 62 GSSSRQISTSLYFAFSTMTFS 82
G Q ST +FAFSTM F+
Sbjct: 611 GPPRFQASTICWFAFSTMVFA 631
>AT2G17260.1 | chr2:7504780-7508266 FORWARD LENGTH=952
Length = 951
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 2 PYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEYQ 61
PY +SGL ++ + ++ W F++P T +W S F+ + +W++E N E++
Sbjct: 590 PYIESGLVVVAPVTRLNEN--PWAFLRPFTLPMWAVTASFFVIVGAAIWILEHRINDEFR 647
Query: 62 GSSSRQISTSLYFAFSTMTFSH 83
G RQI T L+F FSTM FSH
Sbjct: 648 GPPRRQIITILWFTFSTMFFSH 669
>AT5G27100.1 | chr5:9535160-9538311 REVERSE LENGTH=902
Length = 901
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+PYT SG+ LV+ K S R IF+ PLT LWL ++ SF I VVW++E N ++
Sbjct: 545 LPYTPSGVG-LVVPVKDSVRRSSTIFLMPLTLALWLISLLSFFIIGLVVWVLEHRVNPDF 603
Query: 61 QGSSSRQISTSLYFAFSTMTFS 82
G Q+ST +F+FS M F+
Sbjct: 604 DGPGQYQLSTIFWFSFSIMVFA 625
>AT2G24720.1 | chr2:10522783-10525840 REVERSE LENGTH=921
Length = 920
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVWMIERPRNQEY 60
+P+ +SG+ ++V + K R ++ F+KPL+ +LWL + F + VW +E N ++
Sbjct: 551 LPFMKSGVGLIVPLKDEVK-RDKFSFLKPLSIELWLTTLVFFFLVGISVWTLEHRVNSDF 609
Query: 61 QGSSSRQISTSLYFAFSTMTFS 82
+G ++ Q ST +FAFSTM F+
Sbjct: 610 RGPANYQASTIFWFAFSTMVFA 631
>AT5G11180.1 | chr5:3557261-3561575 REVERSE LENGTH=907
Length = 906
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 1 MPYTQSGLSILVLAEKYSKPRIQWIFIKPLTWQLWLAAVSSFLYIAFVVW 50
+PY+++G+ ++V+ K + + +W+F+KPLT +LW +SFLYI + +
Sbjct: 559 LPYSETGI-VVVVPVKDEREKGKWVFLKPLTRELWFLTAASFLYIGIMSY 607
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,128,417
Number of extensions: 70316
Number of successful extensions: 207
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 203
Number of HSP's successfully gapped: 19
Length of query: 98
Length of database: 11,106,569
Length adjustment: 68
Effective length of query: 30
Effective length of database: 9,242,281
Effective search space: 277268430
Effective search space used: 277268430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 104 (44.7 bits)