Os06g0186900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AAA ATPase domain containing protein.
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Os06g0186900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AAA ATPase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.52 | 0.34 | 11.5 | 0.56 | 1.06 | 1.03 | 0.65 | -2.84 | -0.0156 | 16.5 | 25.4 | 23 | -- | -- |
| 54.95 | 0.345 | 11.4 | 0.845 | 1.05 | 0.807 | 0.226 | -- | 0.0206 | 16.4 | 24.11 | 32 | -- | -- |
| 53.48 | 0.341 | 11.5 | 0.626 | 1.06 | 1 | -- | -2.2 | 0.00127 | 16.5 | 25.4 | 21 | -- | -- |
| 55.06 | 0.346 | 11.4 | 0.871 | 1.07 | 0.733 | -- | -- | 0.0313 | 16.4 | 24.1 | 65 | -- | -- |
| 86.11 | 0.432 | 11.5 | 0.25 | -- | 1.91 | -- | -2.98 | -0.217 | -- | 24.2 | 138 | -- | -- |
| 64.43 | 0.376 | 11.4 | 0.982 | 1.36 | -- | 0.504 | -- | 0.117 | 16.1 | -- | -- | -- | -- |
| 65.14 | 0.378 | 11.4 | 0.987 | 1.37 | -- | -- | -- | 0.12 | 16.1 | -- | -- | -- | -- |
| 91.31 | 0.445 | 11.4 | 0.686 | -- | 1.67 | -- | -- | -0.0395 | -- | 24.2 | 123 | -- | -- |
| 69.85 | 0.389 | 11.5 | -- | 0.917 | 1.32 | -- | -- | -0.162 | 16.6 | 17.53 | 124 | -- | -- |
| 166.56 | 0.603 | 11.4 | 0.932 | -- | -- | -- | -- | 0.0831 | -- | -- | -- | -- | -- |
| 90.83 | 0.446 | 11.4 | -- | 1.35 | -- | -- | -- | 0.00958 | 16.1 | -- | -- | -- | -- |
| 102.31 | 0.471 | 11.5 | -- | -- | 1.8 | -- | -- | -0.172 | -- | 24.1 | 131 | -- | -- |
| 189.47 | 0.642 | 11.4 | -- | -- | -- | -- | -- | -0.0203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 2 | 48.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 3 | 48.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 4 | 48.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 5 | 48.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 25 | 49.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 52 | 50.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 59 | 50.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 90 | 50.86 | temperature | 15 | 90 | > th | dose dependent | sin | 2 | NA |
| 113 | 51.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 151 | 51.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 219 | 51.68 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 15 |
| 243 | 51.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 246 | 51.84 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 13 |
| 250 | 51.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 269 | 51.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 315 | 52.09 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 11 |
| 418 | 52.39 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 444 | 52.47 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 463 | 52.53 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 474 | 52.56 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 495 | 52.62 | temperature | 25 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 503 | 52.63 | temperature | 25 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 509 | 52.65 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 17 |
| 514 | 52.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 515 | 52.67 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 541 | 52.71 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 549 | 52.71 | temperature | 25 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 655 | 52.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 657 | 52.83 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 733 | 52.89 | wind | 3 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 745 | 52.90 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 811 | 52.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 869 | 53.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 889 | 53.10 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 942 | 53.23 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 20 |
| 973 | 53.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 23 |