Os06g0186600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0186600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.69 | 0.243 | 13.1 | -0.376 | 0.279 | 0.73 | 0.445 | -0.127 | 0.344 | 22.9 | 21.4 | 1597 | -- | -- |
| 26.56 | 0.24 | 13.1 | -0.323 | 0.276 | 0.709 | 0.449 | -- | 0.346 | 22.8 | 21.8 | 1519 | -- | -- |
| 27.35 | 0.244 | 13.1 | -0.362 | 0.281 | 0.706 | -- | -0.101 | 0.346 | 22.7 | 21.7 | 1526 | -- | -- |
| 27.39 | 0.244 | 13.1 | -0.339 | 0.273 | 0.71 | -- | -- | 0.344 | 22.7 | 21.8 | 1520 | -- | -- |
| 31.32 | 0.261 | 13.1 | -0.299 | -- | 0.681 | -- | 0.00606 | 0.347 | -- | 21.9 | 1097 | -- | -- |
| 42.4 | 0.305 | 13.1 | -0.0301 | 0.283 | -- | 0.415 | -- | 0.563 | 22.9 | -- | -- | -- | -- |
| 43.12 | 0.308 | 13.1 | -0.0469 | 0.281 | -- | -- | -- | 0.562 | 22.9 | -- | -- | -- | -- |
| 31.32 | 0.261 | 13.1 | -0.301 | -- | 0.673 | -- | -- | 0.352 | -- | 21.9 | 1097 | -- | -- |
| 29.75 | 0.254 | 13.1 | -- | 0.273 | 0.588 | -- | -- | 0.401 | 22.5 | 22.1 | 1486 | -- | -- |
| 48.04 | 0.324 | 13.1 | -0.041 | -- | -- | -- | -- | 0.563 | -- | -- | -- | -- | -- |
| 43.18 | 0.307 | 13.1 | -- | 0.281 | -- | -- | -- | 0.567 | 22.9 | -- | -- | -- | -- |
| 33.19 | 0.268 | 13.1 | -- | -- | 0.57 | -- | -- | 0.396 | -- | 22.26 | 1054 | -- | -- |
| 48.08 | 0.324 | 13.1 | -- | -- | -- | -- | -- | 0.568 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 3 | 27.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 4 | 27.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 10 | 27.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 13 | 27.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 18 | 27.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 21 | 27.67 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 28 | 27.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 35 | 27.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 92 | 27.78 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 98 | 27.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 112 | 27.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 114 | 27.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 185 | 27.89 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 231 | 27.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 232 | 27.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 256 | 28.01 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 266 | 28.03 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 276 | 28.06 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 343 | 28.24 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 344 | 28.24 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 354 | 28.26 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 445 | 28.45 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 508 | 28.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 698 | 28.93 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 714 | 28.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 829 | 29.06 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |