Os06g0182400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallophosphoesterase domain containing protein.
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Os06g0182400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallophosphoesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.06 | 0.216 | 9.87 | -1.22 | 0.648 | -0.904 | 0.494 | -0.775 | -0.344 | 7.34 | 26.3 | 307 | -- | -- |
| 21.45 | 0.216 | 9.89 | -1.36 | 0.687 | -0.867 | 0.414 | -- | -0.378 | 7.9 | 26.93 | 484 | -- | -- |
| 21.66 | 0.217 | 9.88 | -1.24 | 0.663 | -0.896 | -- | -0.562 | -0.354 | 7.22 | 26.75 | 311 | -- | -- |
| 21.92 | 0.218 | 9.89 | -1.35 | 0.685 | -0.869 | -- | -- | -0.38 | 7.77 | 26.85 | 463 | -- | -- |
| 37.81 | 0.286 | 9.89 | -1.25 | -- | -0.852 | -- | -0.606 | -0.336 | -- | 26.41 | 1452 | -- | -- |
| 32.4 | 0.267 | 9.85 | -1.13 | 0.515 | -- | 0.436 | -- | -0.185 | 8.22 | -- | -- | -- | -- |
| 32.96 | 0.269 | 9.85 | -1.12 | 0.516 | -- | -- | -- | -0.186 | 8.1 | -- | -- | -- | -- |
| 38.05 | 0.287 | 9.9 | -1.37 | -- | -0.789 | -- | -- | -0.36 | -- | 28.2 | 1426 | -- | -- |
| 64.6 | 0.374 | 9.83 | -- | 0.588 | -0.303 | -- | -- | -0.126 | 7.86 | 26.91 | 405 | -- | -- |
| 47.6 | 0.322 | 9.86 | -1.12 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 66.01 | 0.38 | 9.82 | -- | 0.51 | -- | -- | -- | -0.0609 | 8.26 | -- | -- | -- | -- |
| 78.47 | 0.414 | 9.84 | -- | -- | -0.332 | -- | -- | -0.102 | -- | 24.2 | 48 | -- | -- |
| 80.41 | 0.419 | 9.83 | -- | -- | -- | -- | -- | -0.0557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.20 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 7 | 21.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 11 | 21.43 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 18 | 21.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 19 | 21.56 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 21 | 21.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 27 | 21.58 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 35 | 21.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 37 | 21.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 46 | 21.64 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 74 | 21.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 150 | 21.91 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 203 | 22.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 217 | 22.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 233 | 22.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 17 |
| 260 | 22.09 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 15 |
| 331 | 22.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 332 | 22.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 385 | 22.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 423 | 22.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 9 |
| 487 | 22.36 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 525 | 22.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 589 | 22.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 690 | 22.53 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 703 | 22.54 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 708 | 22.54 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 709 | 22.54 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 710 | 22.54 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 764 | 22.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 803 | 22.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 946 | 22.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |