BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0182400 Os06g0182400|AK068745
         (325 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0182400  Metallophosphoesterase domain containing protein    642   0.0  

>Os06g0182400 Metallophosphoesterase domain containing protein
          Length = 325

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/308 (100%), Positives = 308/308 (100%)

Query: 18  DVHNDWTLEEDSKALHFLQPDLVLFTGDYGNENVQLVKSISDLQLPKAAILGNHDCWHTY 77
           DVHNDWTLEEDSKALHFLQPDLVLFTGDYGNENVQLVKSISDLQLPKAAILGNHDCWHTY
Sbjct: 18  DVHNDWTLEEDSKALHFLQPDLVLFTGDYGNENVQLVKSISDLQLPKAAILGNHDCWHTY 77

Query: 78  QFSEKKVDRVQLQLESLGEQHVGYKCLDFPTIKLSVVGGRPFSCGGNRIFRPKLLSKWYG 137
           QFSEKKVDRVQLQLESLGEQHVGYKCLDFPTIKLSVVGGRPFSCGGNRIFRPKLLSKWYG
Sbjct: 78  QFSEKKVDRVQLQLESLGEQHVGYKCLDFPTIKLSVVGGRPFSCGGNRIFRPKLLSKWYG 137

Query: 138 VNDMAESAKRIYDAATNAPKEHAVILLAHNGPTGLGSRMEDICGRDWVAGGGDHGDPDLE 197
           VNDMAESAKRIYDAATNAPKEHAVILLAHNGPTGLGSRMEDICGRDWVAGGGDHGDPDLE
Sbjct: 138 VNDMAESAKRIYDAATNAPKEHAVILLAHNGPTGLGSRMEDICGRDWVAGGGDHGDPDLE 197

Query: 198 QAISDLQRETGVSIPLVVFGHMHKSLAYGRGLRKMIAFGANRTIYLNGAVVPRVNHAQSS 257
           QAISDLQRETGVSIPLVVFGHMHKSLAYGRGLRKMIAFGANRTIYLNGAVVPRVNHAQSS
Sbjct: 198 QAISDLQRETGVSIPLVVFGHMHKSLAYGRGLRKMIAFGANRTIYLNGAVVPRVNHAQSS 257

Query: 258 RQPAISTSEKTGLEGLTGLMVPTSRAFTIVDLFEGAVEKISEVWVTVGDARTELEQELVL 317
           RQPAISTSEKTGLEGLTGLMVPTSRAFTIVDLFEGAVEKISEVWVTVGDARTELEQELVL
Sbjct: 258 RQPAISTSEKTGLEGLTGLMVPTSRAFTIVDLFEGAVEKISEVWVTVGDARTELEQELVL 317

Query: 318 YKQPREHI 325
           YKQPREHI
Sbjct: 318 YKQPREHI 325



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,009,486
Number of extensions: 469834
Number of successful extensions: 1194
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1194
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 224
Effective length of database: 11,762,187
Effective search space: 2634729888
Effective search space used: 2634729888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)