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Os06g0168000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glutathione S-transferase, C-terminal-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.54 (0.0231) R2 : 0.587
β1 : 0.895 (0.0846) R2dD : 0.105 R2D : 0.0572
β2 : 1.37 (0.0599) R2dC : 0.473 R2C : 0.438
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.386 (0.0493) R2dN8 : 0.0743 R2N8 : 0.018
σ : 0.435
deviance : 86.09
__
_____
C
peak time of C : 17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.45 0.416 9.54 0.872 1.32 0.519 0.475 0.311 0.382 17.4 40.2 15 -- --
78.67 0.413 9.54 0.879 1.32 0.522 0.486 -- 0.383 17.4 40.2 15 -- --
79 0.414 9.54 0.872 1.33 0.508 -- 0.341 0.384 17.4 40.63 15 -- --
79.27 0.415 9.54 0.879 1.32 0.515 -- -- 0.384 17.4 40.3 15 -- --
142.79 0.557 9.55 0.754 -- 1.09 -- 0.036 0.229 -- 33.83 542 -- --
85.67 0.434 9.54 0.894 1.37 -- 0.408 -- 0.384 17 -- -- -- --
86.09 0.435 9.54 0.895 1.37 -- -- -- 0.386 17 -- -- -- --
87.32 0.435 9.53 0.725 -- 1.43 -- -- 0.328 -- 0.01988 629 -- --
99.54 0.465 9.56 -- 1.31 0.548 -- -- 0.286 17.4 40.3 14 -- --
184.49 0.635 9.52 0.845 -- -- -- -- 0.351 -- -- -- -- --
107.21 0.484 9.56 -- 1.35 -- -- -- 0.286 17 -- -- -- --
102.09 0.471 9.53 -- -- 1.54 -- -- 0.322 -- 0.002561 633 -- --
203.33 0.666 9.55 -- -- -- -- -- 0.257 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.09 wind 5.0 90 < th dose independent rect. 3 5
2 67.69 wind 5.0 270 < th dose independent rect. 3 2
3 67.85 precipitation 0.1 90 < th dose independent rect. 3 5
4 67.85 precipitation 0.1 90 < th dose dependent rect. 3 5
6 68.17 wind 9.0 90 < th dose dependent rect. 3 5
7 68.24 wind 9.0 90 < th dose independent rect. 8 19
9 68.39 temperature 10.0 90 > th dose independent rect. 3 5
11 68.39 temperature 30.0 90 < th dose independent rect. 3 5
12 68.39 humidity 50.0 90 > th dose independent rect. 3 5
14 68.39 atmosphere 995.0 90 > th dose independent rect. 3 5
15 68.39 atmosphere 1015.0 90 < th dose independent rect. 3 5
16 68.39 temperature 10.0 90 > th dose independent rect. 8 19
18 68.50 precipitation 0.1 270 < th dose independent rect. 3 2
19 68.50 precipitation 0.1 270 < th dose dependent rect. 3 2
20 68.53 radiation 40.0 90 < th dose independent rect. 3 5
22 68.73 precipitation 0.1 90 < th dose independent rect. 8 19
23 68.73 precipitation 0.1 90 < th dose dependent rect. 8 19
24 68.77 wind 9.0 270 < th dose dependent rect. 3 2
28 68.85 temperature 10.0 90 > th dose dependent rect. 8 6
30 69.05 atmosphere 995.0 90 > th dose independent rect. 8 19
38 69.26 temperature 10.0 270 > th dose independent rect. 3 2
40 69.26 temperature 30.0 270 < th dose independent rect. 3 2
41 69.26 humidity 50.0 270 > th dose independent rect. 3 2
44 69.26 atmosphere 995.0 270 > th dose independent rect. 3 2
45 69.26 atmosphere 1010.0 270 < th dose independent rect. 3 2
47 69.26 radiation 20.0 270 < th dose independent rect. 3 2
50 69.26 temperature 10.0 270 > th dose independent rect. 5 22
51 69.29 wind 9.0 270 < th dose independent rect. 5 22
52 69.29 radiation 40.0 270 < th dose dependent rect. 3 2
55 69.39 radiation 1.0 270 < th dose independent rect. 3 2
66 69.60 temperature 30.0 270 < th dose dependent rect. 3 2
67 69.60 temperature 10.0 10 > th dose dependent rect. 9 5
69 69.61 wind 5.0 270 < th dose independent rect. 1 6
80 69.82 humidity 90.0 90 < th dose independent rect. 8 6
83 69.87 temperature 15.0 90 > th dose independent rect. 14 18
102 69.95 precipitation 0.1 10 < th dose independent rect. 4 5
104 69.95 precipitation 0.1 10 < th dose dependent rect. 4 5
105 69.96 wind 9.0 10 < th dose dependent rect. 4 5
107 69.99 wind 9.0 10 < th dose independent rect. 9 19
112 70.02 temperature 15.0 90 > th dose independent rect. 8 6
113 70.03 wind 9.0 90 < th dose independent rect. 8 6
114 70.03 precipitation 0.1 90 < th dose independent rect. 8 6
116 70.03 humidity 50.0 270 > th dose dependent rect. 3 2
117 70.03 precipitation 0.1 90 < th dose dependent rect. 8 6
120 70.09 temperature 10.0 270 > th dose dependent rect. 8 2
122 70.10 temperature 10.0 10 > th dose independent rect. 4 5
124 70.10 temperature 30.0 10 < th dose independent rect. 4 5
125 70.10 humidity 50.0 10 > th dose independent rect. 4 5
127 70.10 atmosphere 995.0 10 > th dose independent rect. 4 5
128 70.10 atmosphere 1015.0 10 < th dose independent rect. 4 5
129 70.10 temperature 10.0 10 > th dose independent rect. 9 19
157 70.17 atmosphere 995.0 90 > th dose independent rect. 8 6
158 70.17 atmosphere 1015.0 90 < th dose independent rect. 8 6
177 70.20 radiation 1.0 90 > th dose independent rect. 8 6
184 70.21 temperature 10.0 90 > th dose dependent rect. 8 19
199 70.26 precipitation 0.1 90 < th dose independent rect. 14 18
201 70.26 atmosphere 1015.0 90 < th dose independent rect. 8 19
204 70.26 precipitation 0.1 90 < th dose dependent rect. 14 18
205 70.27 wind 9.0 90 < th dose independent rect. 14 18
206 70.27 temperature 10.0 90 > th dose dependent rect. 3 5
225 70.37 radiation 40.0 90 < th dose independent rect. 14 18
228 70.39 wind 9.0 90 < th dose dependent rect. 8 19
239 70.41 temperature 10.0 270 > th dose dependent rect. 6 6
251 70.47 precipitation 0.1 270 < th dose independent rect. 5 22
253 70.47 precipitation 0.1 270 < th dose dependent rect. 5 22
254 70.51 atmosphere 995.0 10 > th dose independent rect. 9 19
257 70.53 radiation 1.0 270 < th dose dependent rect. 3 9
260 70.54 radiation 1.0 270 < th dose dependent rect. 3 7
261 70.55 wind 1.0 90 > th dose independent rect. 8 6
270 70.58 atmosphere 1015.0 270 < th dose dependent rect. 3 2
274 70.61 temperature 15.0 10 > th dose independent rect. 14 19
289 70.70 precipitation 0.1 10 < th dose independent rect. 14 19
291 70.70 precipitation 0.1 10 < th dose dependent rect. 14 19
294 70.71 humidity 50.0 90 > th dose independent rect. 8 6
329 70.80 radiation 1.0 270 < th dose independent rect. 3 9
337 70.84 radiation 1.0 10 > th dose independent rect. 9 5
347 70.88 wind 9.0 10 < th dose independent rect. 9 5
386 70.98 temperature 10.0 10 > th dose independent rect. 9 5
388 70.98 atmosphere 995.0 10 > th dose independent rect. 9 5
389 70.98 atmosphere 1015.0 10 < th dose independent rect. 9 5
394 70.98 temperature 10.0 1440 > th dose independent rect. 9 6
401 70.98 temperature 10.0 1440 > th dose independent rect. 15 18
407 70.99 humidity 50.0 90 > th dose dependent rect. 3 5
413 71.02 atmosphere 995.0 90 > th dose dependent rect. 3 5
416 71.04 temperature 30.0 90 < th dose dependent rect. 3 5
417 71.04 temperature 10.0 10 > th dose dependent rect. 8 20
428 71.06 precipitation 0.1 270 < th dose independent rect. 2 15
429 71.06 wind 9.0 270 < th dose dependent rect. 1 6
430 71.06 precipitation 0.1 270 < th dose dependent rect. 2 15
431 71.07 atmosphere 995.0 90 > th dose independent rect. 14 18
432 71.08 humidity 90.0 270 < th dose independent rect. 8 2
434 71.08 humidity 90.0 10 < th dose independent rect. 9 5
435 71.08 radiation 40.0 90 < th dose dependent rect. 3 6
438 71.10 radiation 30.0 90 < th dose independent rect. 3 8
440 71.11 precipitation 0.1 270 < th dose independent rect. 1 6
444 71.11 precipitation 0.1 270 < th dose dependent rect. 1 6
465 71.16 atmosphere 1015.0 90 < th dose dependent rect. 3 5
471 71.18 radiation 30.0 270 < th dose dependent rect. 1 7
486 71.23 radiation 20.0 270 < th dose independent rect. 1 7
518 71.29 radiation 1.0 270 < th dose dependent rect. 3 14
521 71.31 radiation 10.0 270 < th dose independent rect. 17 9
531 71.34 humidity 50.0 90 > th dose independent rect. 8 19
538 71.37 wind 1.0 270 > th dose independent rect. 3 2
540 71.37 radiation 40.0 10 < th dose independent rect. 4 16
550 71.40 radiation 1.0 270 > th dose independent rect. 6 7
554 71.41 radiation 40.0 90 < th dose independent rect. 3 16
555 71.41 atmosphere 995.0 270 > th dose independent rect. 6 21
566 71.44 wind 9.0 270 < th dose independent rect. 17 9
573 71.46 atmosphere 995.0 270 > th dose independent rect. 17 9
577 71.47 temperature 10.0 270 > th dose independent rect. 17 9
581 71.47 temperature 10.0 270 > th dose independent rect. 2 15
582 71.47 atmosphere 1015.0 270 < th dose independent rect. 2 15
584 71.47 radiation 40.0 270 < th dose dependent rect. 17 9
585 71.48 humidity 50.0 90 > th dose independent rect. 14 18
586 71.48 wind 9.0 270 < th dose dependent rect. 8 2
589 71.50 radiation 1.0 270 > th dose independent rect. 9 1
608 71.57 temperature 15.0 270 > th dose independent rect. 6 7
615 71.58 temperature 10.0 270 > th dose independent rect. 1 6
617 71.58 temperature 30.0 270 < th dose independent rect. 1 6
618 71.58 humidity 50.0 270 > th dose independent rect. 1 6
620 71.58 atmosphere 995.0 270 > th dose independent rect. 1 6
621 71.58 atmosphere 1015.0 270 < th dose independent rect. 1 6
630 71.61 temperature 15.0 270 > th dose independent rect. 9 1
641 71.63 temperature 10.0 270 > th dose dependent rect. 3 2
648 71.66 wind 9.0 270 < th dose independent rect. 6 7
666 71.71 precipitation 0.1 270 < th dose independent rect. 6 7
669 71.71 precipitation 0.1 270 < th dose dependent rect. 6 7
702 71.77 humidity 50.0 270 > th dose independent rect. 9 1
706 71.77 atmosphere 1015.0 90 < th dose independent rect. 14 18
708 71.78 humidity 50.0 270 > th dose independent rect. 17 9
718 71.79 atmosphere 995.0 270 > th dose independent rect. 6 7
719 71.79 atmosphere 1015.0 270 < th dose independent rect. 6 7
725 71.80 precipitation 0.1 270 < th dose independent rect. 9 1
730 71.80 precipitation 0.1 270 < th dose dependent rect. 9 1
742 71.83 wind 9.0 270 < th dose independent rect. 9 1
746 71.83 atmosphere 995.0 10 > th dose independent rect. 14 19
747 71.83 atmosphere 1015.0 10 < th dose independent rect. 9 19
756 71.85 wind 9.0 270 < th dose independent rect. 2 15
764 71.86 wind 9.0 90 < th dose dependent rect. 8 6
768 71.87 precipitation 0.1 270 < th dose independent rect. 10 22
769 71.87 precipitation 0.1 270 < th dose dependent rect. 10 22
771 71.88 atmosphere 995.0 270 > th dose independent rect. 9 1
772 71.88 atmosphere 1015.0 270 < th dose independent rect. 9 1
776 71.88 temperature 10.0 270 > th dose independent rect. 10 23
787 71.91 humidity 50.0 270 > th dose independent rect. 6 7
812 71.96 wind 9.0 1440 < th dose independent rect. 4 5
813 71.96 temperature 10.0 1440 > th dose independent rect. 4 5
816 71.96 humidity 50.0 1440 > th dose independent rect. 4 5
818 71.96 atmosphere 995.0 1440 > th dose independent rect. 4 5
819 71.96 atmosphere 1015.0 1440 < th dose independent rect. 4 5
821 71.96 temperature 10.0 1440 > th dose independent rect. 9 19
838 71.99 precipitation 0.1 270 < th dose independent rect. 17 9
845 71.99 precipitation 0.1 270 < th dose dependent rect. 17 9
878 72.06 atmosphere 1015.0 10 < th dose dependent rect. 8 6
981 72.21 atmosphere 995.0 270 > th dose dependent rect. 4 1
984 72.21 radiation 40.0 90 < th dose dependent rect. 3 8