Os06g0152800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0152800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.61 | 0.299 | 13.3 | -1.66 | 0.386 | 1.16 | 0.0733 | -1.41 | -0.53 | 3.28 | 15.16 | 594 | -- | -- |
| 42.12 | 0.302 | 13.3 | -1.42 | 0.342 | 1.13 | 0.0707 | -- | -0.46 | 3.25 | 13.95 | 660 | -- | -- |
| 40.61 | 0.297 | 13.3 | -1.67 | 0.387 | 1.15 | -- | -1.44 | -0.534 | 3.29 | 15.44 | 588 | -- | -- |
| 42.14 | 0.302 | 13.3 | -1.42 | 0.351 | 1.14 | -- | -- | -0.462 | 3.28 | 13.9 | 651 | -- | -- |
| 43.85 | 0.308 | 13.3 | -1.69 | -- | 1.13 | -- | -1.16 | -0.539 | -- | 15.69 | 955 | -- | -- |
| 57.83 | 0.356 | 13.2 | -1.15 | 0.365 | -- | -0.142 | -- | -0.289 | 0.137 | -- | -- | -- | -- |
| 57.91 | 0.356 | 13.2 | -1.14 | 0.366 | -- | -- | -- | -0.289 | 0.182 | -- | -- | -- | -- |
| 44.92 | 0.312 | 13.3 | -1.45 | -- | 1.15 | -- | -- | -0.472 | -- | 13.07 | 964 | -- | -- |
| 88.26 | 0.44 | 13.2 | -- | 0.509 | 0.493 | -- | -- | -0.235 | 0.791 | 19.74 | 476 | -- | -- |
| 66.34 | 0.381 | 13.2 | -1.13 | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
| 92.21 | 0.449 | 13.2 | -- | 0.351 | -- | -- | -- | -0.162 | 0.00534 | -- | -- | -- | -- |
| 93.87 | 0.451 | 13.2 | -- | -- | 0.519 | -- | -- | -0.234 | -- | 17 | 877 | -- | -- |
| 99.96 | 0.467 | 13.2 | -- | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 9 | 38.05 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 14 | 38.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 45 | 38.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 98 | 39.14 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 198 | 39.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 216 | 39.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 246 | 39.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 254 | 39.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 286 | 40.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 287 | 40.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 423 | 40.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 514 | 40.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 527 | 40.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 570 | 40.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 692 | 40.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 697 | 40.85 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 850 | 41.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 887 | 41.05 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |