BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0152800 Os06g0152800|AK099578
         (394 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53450.1  | chr1:19951747-19953839 REVERSE LENGTH=454          345   3e-95
AT3G14830.1  | chr3:4983386-4985666 FORWARD LENGTH=477            345   3e-95

>AT1G53450.1 | chr1:19951747-19953839 REVERSE LENGTH=454
          Length = 453

 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 180/390 (46%), Positives = 253/390 (64%), Gaps = 24/390 (6%)

Query: 27  LSGVAAAVLDAGGRLGRA-----------VGDVFRRL----RIDEGLDVA-----LAQRH 66
           ++GV+A +LD G ++G+A           V   FRRL    R DE + V+     + + H
Sbjct: 66  INGVSA-ILDIGNKIGQAGVDFGSGLNVMVQQFFRRLPVPFRHDENVFVSTERDTVTRSH 124

Query: 67  RRNGGSRIXXXXXXVDARVSKDSXXXXXXXXXXXXXSGRFARSQGSMNLSATYDSRTSDV 126
           R    ++        D   S  +              G   R++G++ LS++Y++RTS +
Sbjct: 125 RAYVDTKENSAFSKTDT-ASSGTVYEEKVTEFDLRTIGLHRRAKGTVELSSSYETRTSSM 183

Query: 127 ESSVVARGDLWRXXXXXXXX--XXXXPPLFMVQLGPVLFVRDTTLLFPVHLSKRHLIWYG 184
           E S+ ARGDLWR                LF++QLGP+LF+RD+TLL PVHLSK+HL+WYG
Sbjct: 184 EHSLAARGDLWRVEASTSNSPVRDDSSSLFLLQLGPLLFLRDSTLLLPVHLSKQHLLWYG 243

Query: 185 FERKNGVHSVCPAYWSAHRRWFFMSMICLNPFTCSFMDMQFPNGQLRYVAGDGFTTRAFL 244
           ++RK G+HS+CPA WS HRRW  MSM+CLNP  CSF+D+QFPNGQL YV+G+G TT  F+
Sbjct: 244 YDRKKGMHSLCPALWSKHRRWLMMSMLCLNPLDCSFVDLQFPNGQLTYVSGEGLTTSVFV 303

Query: 245 PLCRGIFQAHAKFPGEKKFSYSFKNRSGGSITPMVQWPDKSFSLGTIQTLSWKRCGLMLQ 304
           PLC G+ QA  ++PG+ +FS+S K++ G  ITPM+ WPDKS +LG  Q L+W+R G+ML+
Sbjct: 304 PLCGGLLQAQGQYPGDMRFSFSCKSKQGTRITPMINWPDKSLALGVSQALAWRRSGVMLK 363

Query: 305 PALQFSICPTFGGSRPGLSMELIHSVNENAGVVCGYSHTASPSAYASISIGRSKLNGSAA 364
           PA+Q S+C TFGGS PG+  E+I S+N+N  ++CG + TA PS +AS+S GRSK NG+  
Sbjct: 364 PAIQLSVCSTFGGSNPGIKTEVIQSLNDNINMICGCAFTAHPSTFASVSFGRSKWNGNIG 423

Query: 365 SSGLVLRVDAPLHSFGRPWFSIQMNSGLEF 394
            +G+V+R D PL +  RP FSIQ+N+  EF
Sbjct: 424 RTGIVVRADTPLPNVARPSFSIQINNAFEF 453



>AT3G14830.1 | chr3:4983386-4985666 FORWARD LENGTH=477
          Length = 476

 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 161/294 (54%), Positives = 220/294 (74%), Gaps = 2/294 (0%)

Query: 103 SGRFARSQGSMNLSATYDSRTSDVESSVVARGDLWRXXXXXXXXXXX--XPPLFMVQLGP 160
           +G   RS+G+++ S++YDSRT+ +E S+ ARGDLWR                LF++QLGP
Sbjct: 183 AGLLGRSKGTIDTSSSYDSRTNGMEHSLAARGDLWRVEASHSSSTASDGNSSLFLLQLGP 242

Query: 161 VLFVRDTTLLFPVHLSKRHLIWYGFERKNGVHSVCPAYWSAHRRWFFMSMICLNPFTCSF 220
           +LF+RD+TLL P+HLSK+HL+WYG++RK G+HS+CPA WS HRRW  MSM+ LNP  CSF
Sbjct: 243 LLFLRDSTLLLPLHLSKQHLLWYGYDRKKGMHSLCPAIWSKHRRWLMMSMLSLNPLACSF 302

Query: 221 MDMQFPNGQLRYVAGDGFTTRAFLPLCRGIFQAHAKFPGEKKFSYSFKNRSGGSITPMVQ 280
           MD+QFPNGQL YV+G+G TT AF+P C G+ QA  ++PG+ +FSYS KN+ G  ITPMV 
Sbjct: 303 MDLQFPNGQLTYVSGEGLTTSAFVPFCGGLLQAQGQYPGDMRFSYSCKNKCGTRITPMVH 362

Query: 281 WPDKSFSLGTIQTLSWKRCGLMLQPALQFSICPTFGGSRPGLSMELIHSVNENAGVVCGY 340
           WPDKSF L   Q L+W+R GL+++P +Q S+CPTFGGS PG+  E+IHS++++  ++CGY
Sbjct: 363 WPDKSFGLDLSQPLAWRRSGLLMKPTIQVSVCPTFGGSNPGIKAEVIHSLSDDLNLICGY 422

Query: 341 SHTASPSAYASISIGRSKLNGSAASSGLVLRVDAPLHSFGRPWFSIQMNSGLEF 394
           +  A PSA+AS++ GRSK NG+   +G+V+R D PL S G+P FSIQ+N+  EF
Sbjct: 423 ALNAHPSAFASVAFGRSKWNGNIGRTGIVVRADTPLASIGQPSFSIQLNNAFEF 476



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,828,763
Number of extensions: 314882
Number of successful extensions: 689
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 687
Number of HSP's successfully gapped: 2
Length of query: 394
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 293
Effective length of database: 8,337,553
Effective search space: 2442903029
Effective search space used: 2442903029
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 113 (48.1 bits)