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Os06g0152400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial precursor (EC 2.1.1.114) (Dihydroxyhexaprenylbenzoate methyltransferase) (3,4- dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) (DHHB-MT) (DHHB-MTase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.64 | 0.459 | 6.59 | 0.122 | 0.185 | -1.17 | 0.776 | 0.765 | 0.389 | 4.51 | 23.59 | 859 | -- | -- |
| 96.15 | 0.457 | 6.56 | 0.228 | 0.192 | -1.32 | 0.736 | -- | 0.43 | 4.63 | 23.04 | 871 | -- | -- |
| 97.23 | 0.459 | 6.58 | 0.135 | 0.183 | -1.19 | -- | 0.635 | 0.398 | 4.42 | 23.35 | 859 | -- | -- |
| 97.69 | 0.46 | 6.57 | 0.225 | 0.187 | -1.31 | -- | -- | 0.42 | 4.54 | 23.1 | 870 | -- | -- |
| 99.03 | 0.463 | 6.59 | 0.141 | -- | -1.23 | -- | 0.591 | 0.395 | -- | 23.35 | 929 | -- | -- |
| 118.75 | 0.511 | 6.52 | 0.587 | 0.251 | -- | 0.432 | -- | 0.632 | 3 | -- | -- | -- | -- |
| 119.26 | 0.511 | 6.53 | 0.578 | 0.253 | -- | -- | -- | 0.63 | 2.33 | -- | -- | -- | -- |
| 99.41 | 0.464 | 6.57 | 0.212 | -- | -1.35 | -- | -- | 0.413 | -- | 23.1 | 962 | -- | -- |
| 98.83 | 0.463 | 6.58 | -- | 0.187 | -1.43 | -- | -- | 0.378 | 4.76 | 23.02 | 879 | -- | -- |
| 123.04 | 0.518 | 6.52 | 0.588 | -- | -- | -- | -- | 0.636 | -- | -- | -- | -- | -- |
| 128.05 | 0.529 | 6.54 | -- | 0.264 | -- | -- | -- | 0.566 | 2.37 | -- | -- | -- | -- |
| 100.45 | 0.467 | 6.58 | -- | -- | -1.46 | -- | -- | 0.377 | -- | 23.03 | 981 | -- | -- |
| 132.17 | 0.537 | 6.54 | -- | -- | -- | -- | -- | 0.571 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 12 | 96.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 22 | 96.89 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 29 | 96.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 34 | 97.04 | humidity | 90 | 14400 | > th | dose dependent | sin | 11 | NA |
| 63 | 97.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 91 | 97.43 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 120 | 97.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 150 | 97.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 159 | 97.86 | temperature | 25 | 720 | < th | dose dependent | sin | 2 | NA |
| 166 | 97.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 224 | 98.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 242 | 98.48 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 18 |
| 280 | 98.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 301 | 98.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 318 | 98.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 15 |
| 327 | 99.00 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 335 | 99.05 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 13 |
| 339 | 99.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 365 | 99.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 382 | 99.14 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 417 | 99.22 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 507 | 99.44 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 21 |
| 510 | 99.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 511 | 99.45 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 534 | 99.51 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 595 | 99.60 | radiation | 1 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 600 | 99.61 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 601 | 99.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 620 | 99.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 669 | 99.70 | radiation | 30 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 682 | 99.72 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 734 | 99.78 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 797 | 99.86 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 814 | 99.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 851 | 99.96 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 904 | 100.07 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 912 | 100.08 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 914 | 100.09 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 942 | 100.13 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 978 | 100.21 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 999 | 100.22 | radiation | 1 | 4320 | < th | dose dependent | rect. | 6 | 6 |
