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Os06g0152300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial precursor (EC 2.1.1.114) (Dihydroxyhexaprenylbenzoate methyltransferase) (3,4- dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) (DHHB-MT) (DHHB-MTase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.65 | 0.264 | 10.4 | -0.436 | 0.297 | 0.744 | 0.0877 | 0.265 | -0.216 | 6.97 | 9.847 | 8 | -- | -- |
| 31.64 | 0.262 | 10.4 | -0.473 | 0.294 | 0.739 | 0.0911 | -- | -0.224 | 7 | 8.173 | 3 | -- | -- |
| 31.61 | 0.264 | 10.4 | -0.433 | 0.295 | 0.744 | -- | 0.268 | -0.215 | 6.98 | 9.847 | 8 | -- | -- |
| 31.62 | 0.262 | 10.4 | -0.47 | 0.293 | 0.745 | -- | -- | -0.226 | 6.98 | 8.612 | 2 | -- | -- |
| 36.06 | 0.281 | 10.4 | -0.423 | -- | 0.658 | -- | 0.176 | -0.201 | -- | 14.4 | 4 | -- | -- |
| 36.93 | 0.285 | 10.4 | -0.328 | 0.299 | -- | 0.0658 | -- | -0.121 | 9.79 | -- | -- | -- | -- |
| 36.95 | 0.285 | 10.4 | -0.326 | 0.299 | -- | -- | -- | -0.121 | 9.78 | -- | -- | -- | -- |
| 36.03 | 0.28 | 10.4 | -0.449 | -- | 0.659 | -- | -- | -0.209 | -- | 14.49 | 2 | -- | -- |
| 36.92 | 0.285 | 10.4 | -- | 0.276 | 0.498 | -- | -- | -0.146 | 7.93 | 15.53 | 3 | -- | -- |
| 42.28 | 0.304 | 10.4 | -0.329 | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
| 39.75 | 0.295 | 10.4 | -- | 0.3 | -- | -- | -- | -0.0845 | 9.86 | -- | -- | -- | -- |
| 41.04 | 0.298 | 10.4 | -- | -- | 0.499 | -- | -- | -0.143 | -- | 15.3 | 2 | -- | -- |
| 45.14 | 0.314 | 10.4 | -- | -- | -- | -- | -- | -0.0841 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 2 | 30.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 6 | 30.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 7 | 30.50 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 8 | 30.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 9 | 30.58 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 13 | 30.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 17 |
| 31 | 30.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 35 | 30.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 53 | 30.88 | temperature | 30 | 270 | < th | dose independent | rect. | 23 | 19 |
| 72 | 31.00 | radiation | 10 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 89 | 31.11 | radiation | 10 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 124 | 31.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 126 | 31.26 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 172 | 31.39 | temperature | 30 | 10 | < th | dose independent | rect. | 24 | 19 |
| 213 | 31.48 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 233 | 31.53 | temperature | 30 | 10 | < th | dose independent | rect. | 2 | 17 |
| 249 | 31.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 273 | 31.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 314 | 31.67 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 335 | 31.70 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 344 | 31.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 375 | 31.75 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 450 | 31.86 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 658 | 32.09 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 674 | 32.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 693 | 32.12 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 715 | 32.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 731 | 32.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 733 | 32.16 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 790 | 32.21 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 7 |
| 824 | 32.24 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 837 | 32.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 864 | 32.27 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 915 | 32.30 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 934 | 32.32 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 936 | 32.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 937 | 32.33 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 962 | 32.35 | radiation | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 972 | 32.36 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 3 |
