Os06g0152000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0152000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.64 | 0.44 | 12.4 | -1.88 | 1.11 | -0.963 | 0.761 | 0.562 | 0.167 | 4.29 | 22.53 | 77 | -- | -- |
| 87.96 | 0.437 | 12.4 | -1.84 | 1.11 | -1.08 | 0.925 | -- | 0.178 | 4.21 | 22.26 | 87 | -- | -- |
| 88.89 | 0.439 | 12.4 | -1.96 | 1.11 | -0.83 | -- | 1.1 | 0.14 | 4.3 | 23.3 | 61 | -- | -- |
| 90.17 | 0.442 | 12.4 | -1.84 | 1.12 | -1.12 | -- | -- | 0.178 | 4.29 | 22.11 | 87 | -- | -- |
| 148.31 | 0.567 | 12.4 | -2.18 | -- | -0.625 | -- | 1.75 | 0.0914 | -- | 25.55 | 1277 | -- | -- |
| 100.36 | 0.47 | 12.3 | -1.62 | 1.03 | -- | 0.926 | -- | 0.299 | 4.57 | -- | -- | -- | -- |
| 102.64 | 0.474 | 12.3 | -1.63 | 1.03 | -- | -- | -- | 0.294 | 4.61 | -- | -- | -- | -- |
| 148.01 | 0.567 | 12.4 | -2.09 | -- | -1.23 | -- | -- | 0.156 | -- | 19.43 | 5598 | -- | -- |
| 171.42 | 0.613 | 12.3 | -- | 1.02 | -0.305 | -- | -- | 0.449 | 4.54 | 22.11 | 87 | -- | -- |
| 159.32 | 0.59 | 12.4 | -1.59 | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
| 172.49 | 0.614 | 12.3 | -- | 1 | -- | -- | -- | 0.476 | 4.66 | -- | -- | -- | -- |
| 196.81 | 0.653 | 12.3 | -- | -- | 1.36 | -- | -- | 0.663 | -- | 35.39 | 253 | -- | -- |
| 225.87 | 0.701 | 12.3 | -- | -- | -- | -- | -- | 0.498 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 2 | 83.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 3 | 83.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 4 | 83.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 5 | 83.99 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 8 | 84.05 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 23 | 84.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 27 | 84.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 28 | 84.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 36 | 84.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 38 | 84.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 42 | 84.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 44 | 84.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 50 | 84.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 146 | 84.85 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 169 | 84.92 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 186 | 84.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 219 | 85.02 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 241 | 85.07 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 282 | 85.17 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 334 | 85.26 | temperature | 15.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 361 | 85.30 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 392 | 85.34 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 394 | 85.34 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 416 | 85.37 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 560 | 85.51 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 562 | 85.51 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 606 | 85.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 609 | 85.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 711 | 85.63 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 952 | 85.79 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 982 | 85.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 5 |