Os06g0129200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0129200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.1 | 0.163 | 10.5 | -0.0679 | 0.318 | -0.298 | -0.0361 | 0.0744 | -0.37 | 1.59 | 79.89 | 711 | -- | -- |
| 12.11 | 0.162 | 10.5 | -0.0732 | 0.318 | -0.296 | -0.0257 | -- | -0.371 | 1.6 | 79.93 | 710 | -- | -- |
| 12.11 | 0.162 | 10.5 | -0.0674 | 0.318 | -0.298 | -- | 0.0653 | -0.37 | 1.59 | 79.87 | 710 | -- | -- |
| 12.12 | 0.162 | 10.5 | -0.0723 | 0.318 | -0.296 | -- | -- | -0.371 | 1.6 | 79.9 | 710 | -- | -- |
| 15.26 | 0.183 | 10.5 | -0.0659 | -- | -0.221 | -- | -0.00199 | -0.368 | -- | 79.87 | 710 | -- | -- |
| 13.94 | 0.175 | 10.5 | -0.0885 | 0.352 | -- | -0.0291 | -- | -0.381 | 3.71 | -- | -- | -- | -- |
| 13.94 | 0.175 | 10.5 | -0.0881 | 0.352 | -- | -- | -- | -0.381 | 3.71 | -- | -- | -- | -- |
| 13.27 | 0.17 | 10.5 | -0.0656 | -- | -0.287 | -- | -- | -0.372 | -- | 80 | 260 | -- | -- |
| 12.25 | 0.163 | 10.5 | -- | 0.317 | -0.301 | -- | -- | -0.363 | 1.55 | 79.86 | 710 | -- | -- |
| 20.8 | 0.213 | 10.5 | -0.0734 | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
| 14.15 | 0.176 | 10.5 | -- | 0.35 | -- | -- | -- | -0.371 | 3.71 | -- | -- | -- | -- |
| 13.4 | 0.171 | 10.5 | -- | -- | -0.295 | -- | -- | -0.36 | -- | 79.99 | 253 | -- | -- |
| 20.94 | 0.214 | 10.5 | -- | -- | -- | -- | -- | -0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.25 | humidity | 70 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 21 | 11.61 | radiation | 20 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 24 | 11.61 | radiation | 20 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 26 | 11.62 | radiation | 20 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 39 | 11.63 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 42 | 11.64 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 62 | 11.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 72 | 11.69 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 83 | 11.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 115 | 11.72 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 121 | 11.73 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 124 | 11.74 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 133 | 11.75 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 134 | 11.75 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 137 | 11.75 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 141 | 11.76 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 142 | 11.76 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 145 | 11.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 155 | 11.77 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 157 | 11.77 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 161 | 11.77 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 178 | 11.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 179 | 11.78 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 192 | 11.78 | humidity | 70 | 270 | > th | dose dependent | rect. | 8 | 16 |
| 201 | 11.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 208 | 11.79 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 242 | 11.80 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 12 |
| 246 | 11.81 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 251 | 11.81 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 12 |
| 265 | 11.82 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 295 | 11.83 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 301 | 11.83 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 305 | 11.83 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 322 | 11.83 | wind | 5 | 43200 | < th | dose dependent | sin | 7 | NA |
| 335 | 11.83 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 340 | 11.83 | wind | 3 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 353 | 11.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 367 | 11.84 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 402 | 11.85 | wind | 3 | 43200 | > th | dose independent | sin | 7 | NA |
| 403 | 11.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 455 | 11.86 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 505 | 11.87 | wind | 3 | 43200 | < th | dose independent | sin | 7 | NA |
| 525 | 11.87 | wind | 5 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 526 | 11.87 | humidity | 80 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 527 | 11.87 | radiation | 40 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 592 | 11.88 | wind | 1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 647 | 11.89 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 690 | 11.89 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 13 |
| 841 | 11.92 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 893 | 11.93 | wind | 3 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 965 | 11.94 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 21 |