BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0129200 Os06g0129200|AK102435
(433 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442 314 5e-86
AT4G10800.1 | chr4:6643678-6644529 FORWARD LENGTH=284 243 1e-64
AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549 74 1e-13
AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521 56 4e-08
AT2G13690.1 | chr2:5706704-5708895 REVERSE LENGTH=545 49 5e-06
>AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442
Length = 441
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/449 (40%), Positives = 283/449 (63%), Gaps = 32/449 (7%)
Query: 1 MEPSD--LVDGYKFGDQTTSDVRVCFKRADDQAEWFCCHSSVLSGNSKYFAD-----WLS 53
MEP D Y FGD+++SD+ V + + + +W CHS +LS S+YFAD W +
Sbjct: 1 MEPRDNQAEASYTFGDRSSSDIVVRLRNEEGRDDWIYCHSKILSEKSQYFADRLSDKWPT 60
Query: 54 RNDIGSNNCIGVDCISADYEHYVKVLKLIYLPAESIIDS--FESVRSAVGVLRASTLLKC 111
+ S C+ V C +DY+H++ +L+L+Y+ ++ + + +V+SA+G+L + L C
Sbjct: 61 CKILDSRYCVEVICQESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSALGILSVAKELSC 120
Query: 112 ELITRSCIEYLEAASWDXXXXXXILEVAQSLGSEEAVALLARLQAPNVSAVKNVFISAIR 171
I +C+ YLEA W+ IL + +GSE A +LARLQ + SAV +F+SA R
Sbjct: 121 PQIVTACVNYLEAVPWEEGEEEEILRIVPRIGSE-AEPILARLQPVDQSAVLEIFVSAFR 179
Query: 172 FATSMESPSPPFL-DDLKTSAQEQIDFMLHEDDDTALVTMDEDVRSVVREGLKKLFSTLK 230
FATS SPP L D+K+SAQEQI++M+ EDDD L+ DE+V+ V++ +K LF
Sbjct: 180 FATS----SPPLLLGDIKSSAQEQIEYMITEDDDAPLLIADEEVKLEVKQCVKSLFVRFF 235
Query: 231 IGLDLLT---SEYEQLPEQAEQRVLCSLADIDWMANVLTKIEMMNEFVSGWSEISGYVLS 287
L+ +T E E + ++ R++ L+D+ W+ +LTK+E++ +FV W++IS ++
Sbjct: 236 QCLEEITLKPVESEVINKKGSFRMV--LSDMCWVFQILTKMEVVRDFVITWADISEKLVK 293
Query: 288 VVQDKKYSSGLWL-VKAKLIEVTGKAFDAVGYGSVVFPASSRVHFLRMWLPFMQTTKRLL 346
VV+ + + + ++ K+IEVT K +A+GYG+V+ P + R+ +++WLPF++ TK L+
Sbjct: 294 VVEQLETTVVEAVEIRVKVIEVTAKVIEAIGYGTVILPTAKRLQMVKLWLPFVRNTKPLV 353
Query: 347 D----EKSKDDAIP-QMDADLFQNIEGAIVSLVLALPSGDQADILGEWM-KNAEQFRYPD 400
D E ++D + ++D +++Q +E + VS++LALPS DQA+IL EW+ KN YPD
Sbjct: 354 DSPVREDEENDTVRYKIDGEIWQALESSFVSIILALPSADQAEILTEWLSKNG---LYPD 410
Query: 401 LTEAFEVWCYRSKTAKRR--LVGGLNGSG 427
LTEAFEVWCYRSK AKRR LVGG +G
Sbjct: 411 LTEAFEVWCYRSKVAKRRLGLVGGEEENG 439
>AT4G10800.1 | chr4:6643678-6644529 FORWARD LENGTH=284
Length = 283
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/262 (48%), Positives = 181/262 (69%), Gaps = 8/262 (3%)
Query: 163 KNVFISAIRFATSMES--PSPPFLDDLKTSAQEQIDFMLHEDDDTALVTMDEDVRSVVRE 220
KNVF+SA+ FA S+++ SP +D+LKTSAQEQ++FML ED++ L+ +E+V+SVVR
Sbjct: 13 KNVFLSALHFAMSIDTLKNSPELVDELKTSAQEQVEFMLSEDEEVRLLISEEEVKSVVRL 72
Query: 221 GLKKLFSTLKIGLDLLTSEYEQLPEQAEQRVLCSLADIDWMANVLTKIEMMNEFVSGWSE 280
G+ + S L LD L+S LPE E VL +L DI+W+ VL ++E+M + V W++
Sbjct: 73 GISNVISML---LDRLSSLLVILPECTEFSVLKTLYDIEWLCKVLPRMELMKDLVVKWTD 129
Query: 281 ISGYVLSVVQDKKYSSGLWLVKAKLIEVTGKAFDAVGYGSVVFPASSRVHFLRMWLPFMQ 340
S +L + Q + S + VK KL+EVTGK +AVGYG V+ P+ SR L++WLPF++
Sbjct: 130 ASSEILVIAQKCELDSRILGVKVKLVEVTGKILEAVGYGIVIVPSKSRTCLLKIWLPFIR 189
Query: 341 TTKRLLDEKSKDDAIPQMDADLFQNIEGAIVSLVLALPSGDQADILGEWMKNA--EQFRY 398
K L+D + + +MD DL + IEG++VSLVL LPS DQA++ GEWM+ E ++
Sbjct: 190 RLKTLVDAEGCEYEY-RMDEDLCEFIEGSMVSLVLTLPSNDQAEVFGEWMRGIGLEGVKF 248
Query: 399 PDLTEAFEVWCYRSKTAKRRLV 420
PDL+EAFEVWCYRSK+AKRRLV
Sbjct: 249 PDLSEAFEVWCYRSKSAKRRLV 270
>AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549
Length = 548
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 174/424 (41%), Gaps = 51/424 (12%)
Query: 9 GYKFGDQTTSDVRVCFKRADDQAEWFCCHSSVLSGNSKYFA----DWLSRNDIGSNNCIG 64
G +F D +SDV++ D + C H +L +S++FA D S+ + ++
Sbjct: 132 GNQFNDPNSSDVKLTLSSKDGISITMCVHRQILVAHSRFFAMKLSDRWSKQQLPPSSSPY 191
Query: 65 VDCIS--ADYEHYVKVLKLIYLPAESIIDSFESVRSAVGVLRASTLLKCELITRSCIEYL 122
+ IS D E Y++ L L+Y V +G+L+ S + + SC+EYL
Sbjct: 192 IVEISDCDDVEVYIETLMLMYCRDLRKKMMRHDVSRVLGILKVSAAIGFDAGVLSCLEYL 251
Query: 123 EAASWDXXXXXXILEVAQSLGSEEAVALLARLQAPNVSAVKNVFISAIRFATSMESPSPP 182
EAA W I +LL+ L NV A + + ++ + +
Sbjct: 252 EAAPWSEDEEYRI------------ASLLSELHLENVGATEVLRRVSVEASNGNNGSNGG 299
Query: 183 FLDDLKTSAQEQIDFMLHEDDDTALVTMDEDVRSVVREG-----LKK--LFSTLKIGLDL 235
D++ + + +L D+ A M V ++RE L+K L+ L
Sbjct: 300 SNDEVLLNL---LHIVLEGKDEKARRDMKTLVSKMLRENSSGNDLRKESLYLACDGCLHK 356
Query: 236 LTSEYEQLPEQAEQRV--LCSLAD-IDWMANVLTKIEMMNEFVSGWSEISGYVLSVVQDK 292
L ++ Q E + V + AD + W+ ++L ++ +F+ W+ +S LS V K
Sbjct: 357 LKRQFLQAAESDLENVDQIARQADNLHWILDILIDRQIAEDFIVMWASLSE--LSEVHSK 414
Query: 293 KYSSGLWLVKAKLIEVTGKAFDAVGYGSVVFPASSRVHFLRMWL-PFMQTTKRLLDEKSK 351
+ + ++ VT + F +G G ++ P R LR WL PF D
Sbjct: 415 VPV----VHRFEISRVTARIFVGIGKGQILTPKEVRCLLLRNWLTPFYD------DFGWM 464
Query: 352 DDAIPQMDADLFQNIEGAIVSLVLALPSGDQADILGEWMK---NAEQFRYPDLTEAFEVW 408
A +D L IE + + +L LP Q + W N+ + P++ FEVW
Sbjct: 465 RRASKGLDRYL---IEDGLSNTILTLPLAWQQEFFLAWFDRFLNSNE-DCPNIQRGFEVW 520
Query: 409 CYRS 412
R+
Sbjct: 521 WRRA 524
>AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521
Length = 520
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 166/421 (39%), Gaps = 60/421 (14%)
Query: 11 KFGDQTTSDVRVCFKRADDQAEWFCCHSSVLSGNSKYFADWLSRNDIGSNNCIGVDCISA 70
+FG+ +SD +V H VL +S +FA L+ D C+ ++
Sbjct: 118 EFGEPGSSDAKVILVGKQGFCVKLSVHKKVLVDHSCFFAKKLAEKD-SVFACLEIESCE- 175
Query: 71 DYEHYVKVLKLIYLPAESIIDSFESVRSAVGVLRASTLLKCELITRSCIEYLEAASWDXX 130
D E YV+ + L+Y ++V + VL+ + LL +SC++YLEA W
Sbjct: 176 DAELYVETIGLMYCKDMKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLDYLEAVPW--- 232
Query: 131 XXXXILEVAQSLGSEE---AVALLARLQAPNVSAVKNVFISAIRFATSMESPSPPFLDDL 187
+G EE ++ + RL+ + V ++ + + + PP
Sbjct: 233 -----------VGEEEEEKVISSILRLK------TEGVGVTPVLKRVASNAVDPP----- 270
Query: 188 KTSAQEQIDFMLHEDDDTALVTMDEDVRSVVRE--GLK-------KLFSTLKIGLDLLTS 238
K + I+ +L ++ + M V ++RE G ++S+ + LD + S
Sbjct: 271 KETLSRIIELVLRSKEEKSRREMKSIVLKLLREQNGANVADNFNDTIYSSCQTCLDSVLS 330
Query: 239 EYEQL-----PEQAEQRVLCSLADIDWMANVLTKIEMMNEFVSGWSEISGYVLSVVQDKK 293
++Q PE +++ ++ W+ +VL + + EF W+ + L+++ +K
Sbjct: 331 LFKQASEGEKPETDTKQIAVEADNLTWLLDVLAERQAAEEFSVTWA--NQKELALLHEKL 388
Query: 294 YSSGLWLVKAKLIEVTGKAFDAVGYGSVVFPASSRVHFLRMWLPFMQTTKRLLDEKSKDD 353
+ + + VT + F +G G + P+ L D
Sbjct: 389 P----LMSRYHISRVTSRLFIGIGRGE-LLPSKDTRLLLLT----TWLQPLFNDYNWLQH 439
Query: 354 AIPQMDADLFQNIEGAIVSLVLALPSGDQADILGEWMKNAEQF--RYPDLTEAFEVWCYR 411
D L +E I +L LP DQ IL W+ + P+L AFEVW R
Sbjct: 440 GCRSFDGKL---VEEGIGRTILTLPLEDQQSILLSWLGSFLNGGDGCPNLQRAFEVWWRR 496
Query: 412 S 412
S
Sbjct: 497 S 497
>AT2G13690.1 | chr2:5706704-5708895 REVERSE LENGTH=545
Length = 544
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 41/367 (11%)
Query: 60 NNCIGVDCISADYEHYVKVLKLIYLPAESIIDSFES--VRSAVGVLRASTLLKCELITRS 117
N C C + + + ++L++ + II F + V A+ VL + +K S
Sbjct: 194 NTCRIEVCDVENLGVFRETVELMFEESNVIIKKFMTMGVYRAIDVLEVAAGIKFSRAVLS 253
Query: 118 CIEYLEAASW--DXXXXXXILEVAQSLGSEEAVALLARLQAPNVSAVKNVFISAIRFATS 175
C++YLEA W D L S + +LAR + +++ + ++ +
Sbjct: 254 CLKYLEAVPWTEDEEEKLRRLLGIYSFDDDAVSEILARFNSNETENLQDSLSKKLVWSIT 313
Query: 176 MESPSPPFLDDLKTSAQEQI-DFMLHEDDDTALVTMDEDVRSVVREGLKKLFSTLKIGLD 234
S P ++LK+ + + ++E + + D + R G + S K+ +
Sbjct: 314 SCSDVNP-RNELKSLVKGLLCKSSVYEKEQPEINKED-----IYRAGKCCVDSLAKLFEE 367
Query: 235 LLTSEYEQLPEQAEQRVLCSLADIDWMANVLTKIEMMNEFVSGWSEISGYVLSVVQDKKY 294
+S + + + + + +I+W+ ++ E+ EFV W G +V+ +
Sbjct: 368 GSSSSSSKKEKPLIESISREVENINWLLEIMIDREIAEEFVEIW----GKQRRLVEMHER 423
Query: 295 SSGLWLVKAKLIEVTGKAFDAVGYGSVVFPASSRVHFLRMWLP-------FMQTTKRLLD 347
S +V+ ++ VTG F A+G V +R + W ++Q K+ LD
Sbjct: 424 VSP--MVRYEVSRVTGAIFIAMGKRRVQCGGEARAGLVEAWFKPMLVDFGWLQRCKKGLD 481
Query: 348 EKSKDDAIPQMDADLFQNIEGAIVSLVLALPSGDQADILGEWMK--NAEQFRYPDLTEAF 405
+ +E + +L LP +Q + EW + + P+L++AF
Sbjct: 482 ---------------MREVEEGMGQTLLTLPVKEQYQVFMEWFRWFSKHGTECPNLSKAF 526
Query: 406 EVWCYRS 412
++W RS
Sbjct: 527 QIWWRRS 533
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,090,513
Number of extensions: 362044
Number of successful extensions: 964
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 948
Number of HSP's successfully gapped: 5
Length of query: 433
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 332
Effective length of database: 8,337,553
Effective search space: 2768067596
Effective search space used: 2768067596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)