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Os06g0126500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.57 (0.0624) R2 : 0.591
β1 : -4.81 (0.233) R2dD : 0.418 R2D : 0.228
β2 : 1.38 (0.154) R2dC : 0.0745 R2C : 0.0331
β3 : 3.26 (0.187) R2dE : 0.29 R2E : 0.109
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.607 (0.133) R2dN8 : 0.0253 R2N8 : -0.00198
σ : 1.16
deviance : 625.13
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C
peak time of C : 9.59
E
wheather : temperature
threshold : 26.62
memory length : 1084
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 8.67
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
612.33 1.16 7.81 -6.74 1.38 4.13 -0.629 -9.17 -0.987 9.55 26.7 1154 10.1 --
624.98 1.16 7.59 -4.8 1.4 3.25 -0.274 -- -0.653 9.69 26.5 1084 8.79 --
612.98 1.15 7.79 -6.56 1.38 4.06 -- -8.49 -0.909 9.44 26.71 1141 9.43 --
625.13 1.16 7.57 -4.81 1.38 3.26 -- -- -0.607 9.59 26.62 1084 8.67 --
704 1.24 7.77 -6.25 -- 3.81 -- -6.93 -0.805 -- 26.7 1233 8.24 --
1008.37 1.49 7.6 -4.03 1.32 -- 1.24 -- -0.742 6.98 -- -- -- --
1011.17 1.49 7.6 -4.01 1.33 -- -- -- -0.742 7.37 -- -- -- --
718.75 1.25 7.6 -4.83 -- 3.13 -- -- -0.596 -- 26.7 1195 7.76 --
1203.39 1.62 7.43 -- 1.38 2.65 -- -- 0.0228 9.32 27.18 986 6.7 --
1104.83 1.55 7.63 -3.98 -- -- -- -- -0.72 -- -- -- -- --
1434.21 1.77 7.5 -- 1.29 -- -- -- -0.296 7.58 -- -- -- --
1298.71 1.68 7.47 -- -- 2.35 -- -- -0.0193 -- 27.2 1161 6.95 --
1523.61 1.82 7.53 -- -- -- -- -- -0.278 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 658.51 temperature 25 1440 > th dose dependent rect. 15 4
2 659.82 temperature 25 1440 > th dose dependent rect. 16 1
43 667.90 temperature 25 1440 > th dose dependent rect. 13 20
44 668.21 temperature 25 1440 > th dose dependent sin 18 NA
117 674.13 temperature 25 1440 > th dose dependent rect. 6 16
182 676.38 radiation 20 1440 < th dose dependent rect. 18 10
191 676.87 humidity 80 1440 < th dose dependent rect. 16 5
195 676.90 temperature 30 1440 < th dose independent sin 14 NA
207 677.31 temperature 30 1440 < th dose independent rect. 14 15
218 677.44 temperature 30 1440 < th dose independent rect. 14 17
226 677.67 temperature 30 1440 < th dose independent rect. 14 11
233 677.79 temperature 30 1440 < th dose independent rect. 14 7
239 677.85 temperature 30 1440 > th dose independent rect. 15 4
265 678.08 temperature 25 1440 > th dose dependent no NA NA
280 678.46 temperature 30 1440 > th dose independent sin 13 NA
342 680.94 wind 5 43200 > th dose dependent rect. 3 13
345 681.27 wind 3 43200 > th dose dependent rect. 24 16
346 681.33 wind 5 43200 < th dose independent rect. 3 13
350 681.62 temperature 30 1440 < th dose independent rect. 14 20
360 681.88 temperature 30 1440 < th dose independent rect. 14 22
362 681.98 wind 7 43200 < th dose independent rect. 24 16
364 682.09 wind 5 43200 > th dose independent rect. 3 13
366 682.13 wind 7 43200 > th dose independent rect. 24 16
372 682.33 wind 7 43200 > th dose independent rect. 20 20
401 682.85 radiation 10 1440 < th dose dependent rect. 18 2
410 682.99 wind 7 43200 < th dose independent rect. 19 21
450 684.45 wind 5 43200 > th dose dependent rect. 7 9
455 684.65 temperature 30 1440 < th dose independent rect. 9 20
456 684.66 temperature 30 1440 < th dose independent rect. 9 22
460 684.72 temperature 30 1440 < th dose independent rect. 11 18
464 684.76 temperature 30 1440 < th dose independent rect. 11 20
466 684.77 wind 5 43200 > th dose dependent sin 2 NA
477 684.87 temperature 30 1440 > th dose independent rect. 14 20
478 684.88 temperature 30 1440 < th dose independent rect. 9 16
483 684.97 temperature 30 1440 < th dose independent rect. 11 14
501 685.01 temperature 30 1440 < th dose independent rect. 9 12
513 685.11 temperature 30 1440 < th dose independent rect. 11 10
533 685.46 humidity 70 14400 < th dose independent rect. 18 14
536 685.47 temperature 30 1440 > th dose independent rect. 14 22
538 685.50 wind 5 43200 > th dose dependent rect. 19 22
568 685.77 wind 5 43200 < th dose independent sin 2 NA
586 686.16 wind 5 43200 > th dose independent sin 2 NA
595 686.37 temperature 30 1440 < th dose independent rect. 17 23
624 686.65 humidity 70 14400 < th dose independent rect. 18 4
645 686.82 wind 7 43200 < th dose independent rect. 1 21
664 687.18 wind 7 43200 < th dose independent rect. 15 23
665 687.21 wind 7 43200 > th dose independent rect. 1 21
682 687.53 wind 7 43200 > th dose independent rect. 15 23
690 687.62 temperature 30 1440 < th dose independent rect. 23 22
693 687.64 temperature 30 1440 < th dose independent rect. 6 23
709 687.73 temperature 30 1440 < th dose independent rect. 2 23
710 687.74 temperature 30 1440 < th dose independent no NA NA
712 687.76 wind 5 43200 > th dose dependent rect. 10 20
718 687.78 temperature 30 1440 < th dose independent rect. 20 23
753 687.86 temperature 30 1440 < th dose independent rect. 2 19
785 687.99 temperature 30 1440 < th dose independent rect. 6 15
836 688.19 wind 5 43200 > th dose dependent rect. 24 22
847 688.33 humidity 80 1440 < th dose dependent rect. 16 16
850 688.37 wind 7 43200 < th dose independent rect. 8 23
870 688.69 wind 7 43200 > th dose independent rect. 9 22
906 688.89 humidity 70 14400 < th dose dependent rect. 17 14
910 688.93 wind 7 43200 < th dose independent no NA NA
918 688.97 temperature 30 1440 > th dose independent rect. 11 8
942 689.09 temperature 30 1440 > th dose independent rect. 9 10
968 689.23 wind 7 43200 > th dose independent no NA NA