Os06g0109500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0109500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 252.68 | 0.747 | 6.52 | -2.44 | 1.61 | 0.277 | -1.19 | -7.74 | -0.136 | 7.31 | 16.25 | 325 | -- | -- |
| 293.88 | 0.805 | 6.36 | -1.16 | 1.61 | 0.116 | 0.157 | -- | 0.218 | 7.34 | -1.776 | 36 | -- | -- |
| 254.85 | 0.749 | 6.47 | -2.1 | 1.58 | 0.236 | -- | -6.39 | -0.042 | 7.39 | 16.03 | 245 | -- | -- |
| 293.93 | 0.804 | 6.36 | -1.16 | 1.61 | 0.114 | -- | -- | 0.218 | 7.35 | 12.42 | 510 | -- | -- |
| 368.8 | 0.894 | 6.48 | -1.88 | -- | -0.908 | -- | -5.52 | 0.166 | -- | 18.5 | 448 | -- | -- |
| 294.01 | 0.804 | 6.35 | -1.14 | 1.61 | -- | 0.135 | -- | 0.235 | 7.42 | -- | -- | -- | -- |
| 294.06 | 0.803 | 6.35 | -1.14 | 1.61 | -- | -- | -- | 0.235 | 7.42 | -- | -- | -- | -- |
| 361.72 | 0.886 | 6.36 | -0.84 | -- | -1.57 | -- | -- | 0.4 | -- | 24.85 | 546 | -- | -- |
| 295.72 | 0.801 | 6.26 | -- | 1.6 | -0.832 | -- | -- | 0.678 | 7.37 | 25.96 | 47520 | -- | -- |
| 431.7 | 0.971 | 6.39 | -1.11 | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
| 328.13 | 0.847 | 6.33 | -- | 1.6 | -- | -- | -- | 0.361 | 7.47 | -- | -- | -- | -- |
| 379.29 | 0.907 | 6.34 | -- | -- | -1.7 | -- | -- | 0.489 | -- | 24.7 | 547 | -- | -- |
| 464.28 | 1.01 | 6.36 | -- | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 249.39 | temperature | 10 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 4 | 249.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 5 | 250.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 7 | 250.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 9 | 250.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 11 | 251.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 16 | 251.64 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 17 | 251.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 18 | 251.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 19 | 251.78 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 26 | 252.27 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 28 | 252.41 | wind | 7 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 35 | 252.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 42 | 253.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 57 | 253.62 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 58 | 253.62 | wind | 7 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 63 | 253.76 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 68 | 253.98 | wind | 7 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 69 | 253.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 88 | 254.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 93 | 254.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 96 | 254.55 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 109 | 254.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 113 | 254.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 122 | 254.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 12 |
| 126 | 255.05 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 128 | 255.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 130 | 255.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 134 | 255.23 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 145 | 255.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 162 | 255.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 164 | 255.50 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 166 | 255.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 168 | 255.54 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 173 | 255.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 184 | 255.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 209 | 255.82 | humidity | 60 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 217 | 255.86 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 224 | 255.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 237 | 255.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 252 | 256.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 265 | 256.13 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 275 | 256.20 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 278 | 256.21 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 309 | 256.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 310 | 256.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 314 | 256.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 315 | 256.34 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 320 | 256.37 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 325 | 256.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 349 | 256.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 353 | 256.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 382 | 256.65 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 384 | 256.65 | temperature | 30 | 10 | < th | dose dependent | sin | 18 | NA |
| 404 | 256.72 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 416 | 256.75 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 474 | 256.93 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 521 | 257.06 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 535 | 257.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 628 | 257.33 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 24 | 2 |
| 652 | 257.40 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 659 | 257.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 665 | 257.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 687 | 257.48 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 694 | 257.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 718 | 257.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 727 | 257.58 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 772 | 257.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 795 | 257.72 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 958 | 258.06 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 972 | 258.08 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 977 | 258.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 993 | 258.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |