Os06g0108500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os06g0108500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 352.56 | 0.882 | 9.07 | -1.84 | 1.08 | 1.55 | 1.73 | -9.02 | 1.61 | 2.79 | 16.57 | 4312 | -- | -- |
| 434.94 | 0.979 | 8.71 | 0.778 | 1.83 | 2.44 | 1.91 | -- | 2.25 | 2.7 | 4.236 | 23203 | -- | -- |
| 359.63 | 0.883 | 9.1 | -2.06 | 1.14 | 1.52 | -- | -9.39 | 1.54 | 3.24 | 17.25 | 4627 | -- | -- |
| 420.36 | 0.955 | 8.72 | 0.484 | 1.2 | 2.13 | -- | -- | 2.18 | 3.83 | 7.332 | 1980 | -- | -- |
| 429.34 | 0.965 | 9.09 | -2.03 | -- | 1.78 | -- | -9.28 | 1.54 | -- | 17 | 4158 | -- | -- |
| 491.75 | 1.04 | 8.63 | 1.24 | 1.14 | -- | 1.51 | -- | 2.59 | 2.8 | -- | -- | -- | -- |
| 498.59 | 1.05 | 8.63 | 1.2 | 1.17 | -- | -- | -- | 2.58 | 3.24 | -- | -- | -- | -- |
| 477.97 | 1.02 | 8.73 | 0.393 | -- | 2.18 | -- | -- | 2.16 | -- | 8.104 | 2565 | -- | -- |
| 425.59 | 0.961 | 8.74 | -- | 1.21 | 2.34 | -- | -- | 2.09 | 3.93 | 8.191 | 2012 | -- | -- |
| 575.86 | 1.12 | 8.63 | 1.25 | -- | -- | -- | -- | 2.61 | -- | -- | -- | -- | -- |
| 536.78 | 1.08 | 8.66 | -- | 1.19 | -- | -- | -- | 2.45 | 3.24 | -- | -- | -- | -- |
| 481.34 | 1.02 | 8.75 | -- | -- | 2.34 | -- | -- | 2.09 | -- | 8.001 | 2578 | -- | -- |
| 617.3 | 1.16 | 8.66 | -- | -- | -- | -- | -- | 2.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 336.77 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 2 | 338.46 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 5 | 339.55 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 8 | 340.18 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 11 | 340.24 | wind | 1 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 27 | 341.27 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 29 | 341.35 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 31 | 341.42 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 32 | 341.45 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 34 | 341.51 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 40 | 341.58 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 42 | 341.65 | radiation | 10 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 55 | 341.77 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 58 | 341.78 | radiation | 10 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 66 | 341.88 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 69 | 341.90 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 77 | 341.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 87 | 342.03 | temperature | 20 | 43200 | > th | dose independent | sin | 12 | NA |
| 99 | 342.06 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 121 | 342.23 | temperature | 20 | 43200 | < th | dose independent | sin | 12 | NA |
| 155 | 342.45 | temperature | 25 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 185 | 342.60 | temperature | 10 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 189 | 342.63 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 267 | 343.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 292 | 343.13 | temperature | 20 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 305 | 343.19 | temperature | 20 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 319 | 343.23 | temperature | 20 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 357 | 343.37 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 417 | 343.58 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 448 | 343.67 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 505 | 343.83 | radiation | 10 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 606 | 344.21 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 659 | 344.40 | temperature | 15 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 687 | 344.49 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 691 | 344.51 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 712 | 344.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 757 | 344.69 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 795 | 344.81 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 798 | 344.82 | temperature | 20 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 802 | 344.83 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 823 | 344.88 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 832 | 344.90 | temperature | 20 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 859 | 344.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 861 | 345.00 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 881 | 345.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 893 | 345.06 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 925 | 345.13 | temperature | 20 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 974 | 345.25 | temperature | 20 | 43200 | < th | dose independent | rect. | 2 | 23 |