Os06g0104400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os06g0104400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.86 | 0.322 | 10.4 | 1.64 | 1.56 | -0.656 | -0.18 | -0.535 | 0.339 | 21.3 | 0.26 | 245 | -- | -- |
| 47.32 | 0.32 | 10.4 | 1.64 | 1.63 | -0.622 | -0.633 | -- | 0.335 | 21.2 | 0.0005641 | 196 | -- | -- |
| 46.39 | 0.317 | 10.4 | 1.65 | 1.61 | -0.663 | -- | -0.615 | 0.348 | 21.3 | 0.24 | 205 | -- | -- |
| 48.57 | 0.325 | 10.4 | 1.63 | 1.62 | -0.627 | -- | -- | 0.335 | 21.2 | 0.03906 | 191 | -- | -- |
| 63.87 | 0.372 | 10.3 | 1.43 | -- | -2.05 | -- | 0.586 | 0.295 | -- | 0.3005 | 901 | -- | -- |
| 51.84 | 0.338 | 10.4 | 1.7 | 1.46 | -- | -0.241 | -- | 0.368 | 19.4 | -- | -- | -- | -- |
| 51.99 | 0.338 | 10.4 | 1.7 | 1.46 | -- | -- | -- | 0.368 | 19.4 | -- | -- | -- | -- |
| 62.65 | 0.369 | 10.3 | 1.48 | -- | -2.02 | -- | -- | 0.279 | -- | 0.3078 | 904 | -- | -- |
| 119.97 | 0.51 | 10.4 | -- | 1.74 | -0.607 | -- | -- | 0.241 | 21.1 | 0.00168 | 155 | -- | -- |
| 165.95 | 0.602 | 10.3 | 1.68 | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
| 128.23 | 0.53 | 10.4 | -- | 1.45 | -- | -- | -- | 0.179 | 19.4 | -- | -- | -- | -- |
| 117.84 | 0.506 | 10.4 | -- | -- | -2.24 | -- | -- | 0.0999 | -- | 0.005378 | 916 | -- | -- |
| 240.09 | 0.723 | 10.4 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 2 | 41.21 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 3 | 41.29 | radiation | 10.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 4 | 41.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 7 | 41.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 10 | 41.74 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 16 | 41.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 20 | 42.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 21 | 42.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 14 |
| 22 | 42.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 23 | 42.13 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 25 | 42.14 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 29 | 42.17 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 32 | 42.28 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 33 | 42.32 | radiation | 10.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 34 | 42.32 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 9 |
| 36 | 42.35 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 37 | 42.35 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 38 | 42.35 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 39 | 42.35 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 40 | 42.35 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 43 | 42.35 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 47 | 42.35 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 49 | 42.35 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 54 | 42.40 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 66 | 42.51 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 10 |
| 67 | 42.51 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 68 | 42.53 | humidity | 80.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 78 | 42.72 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 79 | 42.72 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 6 |
| 103 | 42.85 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 128 | 42.92 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 130 | 42.93 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 132 | 42.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 135 | 42.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 139 | 42.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 144 | 42.95 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 145 | 42.95 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 149 | 42.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 152 | 42.99 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 169 | 43.14 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 177 | 43.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 182 | 43.28 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 184 | 43.30 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 213 | 43.48 | radiation | 20.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 229 | 43.49 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 241 | 43.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 243 | 43.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 248 | 43.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 251 | 43.55 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 252 | 43.55 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 256 | 43.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 258 | 43.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 261 | 43.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 262 | 43.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 264 | 43.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 280 | 43.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 282 | 43.66 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 284 | 43.67 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 290 | 43.69 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 295 | 43.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 10 |
| 300 | 43.71 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 5 |
| 306 | 43.73 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 7 |
| 310 | 43.74 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 312 | 43.74 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 10 |
| 319 | 43.77 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 320 | 43.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 364 | 43.84 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 368 | 43.85 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 385 | 43.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 394 | 43.92 | humidity | 50.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 401 | 43.93 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 402 | 43.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 406 | 43.93 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 410 | 43.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 416 | 43.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 427 | 43.96 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 4 |
| 429 | 43.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 432 | 43.96 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 433 | 43.96 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 445 | 44.01 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 451 | 44.02 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 478 | 44.08 | wind | 1.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 480 | 44.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 20 |
| 482 | 44.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 492 | 44.10 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 494 | 44.11 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 507 | 44.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 548 | 44.21 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 562 | 44.24 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 564 | 44.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 566 | 44.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 567 | 44.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 579 | 44.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 22 |
| 580 | 44.24 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 594 | 44.26 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 597 | 44.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 2 |
| 601 | 44.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 609 | 44.28 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 659 | 44.36 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 671 | 44.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 22 |
| 675 | 44.39 | wind | 3.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 681 | 44.39 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 695 | 44.41 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 721 | 44.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 726 | 44.46 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 736 | 44.47 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 15 |
| 737 | 44.48 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 756 | 44.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 757 | 44.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 833 | 44.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 847 | 44.58 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 867 | 44.61 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 881 | 44.63 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 932 | 44.69 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 956 | 44.71 | humidity | 50.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 990 | 44.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 21 |