Os06g0104000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0104000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.83 | 0.297 | 12.4 | -0.345 | 0.343 | 0.0132 | 0.0307 | 4.37 | -0.25 | 18.6 | 30.01 | 1514 | -- | -- |
| 40.27 | 0.296 | 12.6 | -1.14 | 0.255 | 0.497 | -0.0696 | -- | -0.438 | 18.4 | 29.2 | 5976 | -- | -- |
| 39.83 | 0.294 | 12.4 | -0.345 | 0.343 | 0.0128 | -- | 4.39 | -0.25 | 18.6 | 30.01 | 1519 | -- | -- |
| 40.11 | 0.295 | 12.6 | -1.16 | 0.26 | 0.51 | -- | -- | -0.434 | 18.5 | 29.29 | 6001 | -- | -- |
| 44.71 | 0.311 | 12.4 | -0.424 | -- | 0.135 | -- | 4.61 | -0.243 | -- | 29.8 | 2138 | -- | -- |
| 52.65 | 0.34 | 12.6 | -1.03 | 0.317 | -- | -0.0683 | -- | -0.376 | 19.1 | -- | -- | -- | -- |
| 52.66 | 0.34 | 12.6 | -1.03 | 0.317 | -- | -- | -- | -0.376 | 19 | -- | -- | -- | -- |
| 44.09 | 0.309 | 12.6 | -1.23 | -- | 0.581 | -- | -- | -0.455 | -- | 29.3 | 6302 | -- | -- |
| 76.15 | 0.406 | 12.5 | -- | 0.331 | 0.371 | -- | -- | -0.18 | 18.3 | 30.33 | 3505 | -- | -- |
| 57.96 | 0.356 | 12.5 | -1.03 | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
| 80.46 | 0.42 | 12.5 | -- | 0.329 | -- | -- | -- | -0.262 | 18.8 | -- | -- | -- | -- |
| 80.48 | 0.418 | 12.5 | -- | -- | 0.361 | -- | -- | -0.246 | -- | 30.3 | 6279 | -- | -- |
| 86.12 | 0.433 | 12.5 | -- | -- | -- | -- | -- | -0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 4 | 38.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 10 | 39.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 11 | 39.14 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 15 | 39.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 16 | 39.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 17 | 39.27 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 19 | 39.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 20 | 39.30 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 23 | 39.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 25 | 39.36 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 28 | 39.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 29 | 39.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 38 | 39.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 56 | 39.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 62 | 39.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 67 | 39.49 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 75 | 39.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 76 | 39.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 77 | 39.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 110 | 39.66 | temperature | 30.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 123 | 39.69 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 124 | 39.70 | temperature | 30.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 161 | 39.78 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 169 | 39.82 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 175 | 39.86 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 182 | 39.89 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 184 | 39.90 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 189 | 39.91 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 212 | 39.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 218 | 39.96 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 232 | 39.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 249 | 39.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 251 | 39.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 262 | 40.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 263 | 40.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 278 | 40.02 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 436 | 40.04 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 444 | 40.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 447 | 40.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 457 | 40.05 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 460 | 40.06 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 465 | 40.06 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 478 | 40.06 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 647 | 40.12 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 650 | 40.13 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 654 | 40.14 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 678 | 40.16 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 696 | 40.17 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 708 | 40.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 718 | 40.19 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 790 | 40.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 806 | 40.28 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 819 | 40.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 835 | 40.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 841 | 40.32 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 865 | 40.34 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 880 | 40.35 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 883 | 40.36 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 906 | 40.38 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 2 |