BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0104000 Os06g0104000|AK068490
         (718 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46915.1  | chr2:19274018-19277707 REVERSE LENGTH=709          614   e-176
AT3G19340.1  | chr3:6701387-6704071 REVERSE LENGTH=488             89   9e-18
AT5G13940.1  | chr5:4490263-4495585 REVERSE LENGTH=810             87   3e-17

>AT2G46915.1 | chr2:19274018-19277707 REVERSE LENGTH=709
          Length = 708

 Score =  614 bits (1583), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 329/654 (50%), Positives = 435/654 (66%), Gaps = 27/654 (4%)

Query: 65  PTVDDDGDFDLKGRK-----AIPGIHVPRQRYIAVSKPALLDALLS-LFPSQXXXXXXXX 118
           P+ +D G+  ++         I  IHVPR++YI VSK  L++ +++ L  SQ        
Sbjct: 74  PSAEDGGEGGVEDDDSEEEEGISSIHVPREKYINVSKSDLVNGIVTKLLDSQDGGDADI- 132

Query: 119 XXXXDFKRFARCLDALLHAEHKEMLEEMRTYYMLTHNHHQHTXXXXXXXXXQSVLNGNAN 178
                F   + CLD++LHAEHK +LE+MR  ++ T +  +           + + N    
Sbjct: 133 -----FLLLSSCLDSILHAEHKRILEQMRADFVATQSLEE-----------EELKNSEPR 176

Query: 179 TTAGFFGITDNXXXXXXXXXXXXXXXXXXPDPDSHNRIAFATHFQRSFMNLLRNAQFEEL 238
           +  G+ G++                        + + +A AT FQRSF+ LL NA FEEL
Sbjct: 177 SVNGYEGLSFPLADGFDIWNFLISSGKHAKKRSAESVMA-ATRFQRSFIQLLDNAGFEEL 235

Query: 239 SAQDLLLTYALNTDYLLTLPIYVDWKKAAESNAIIFRRGYATERQKGLLLVEKLDYLQSK 298
           SA+DL LT ALNTDYLLTLP+YVDWKKA+ESNAI+FRRG+ATE++KGLLLVEKLDY+QSK
Sbjct: 236 SARDLALTSALNTDYLLTLPVYVDWKKASESNAIVFRRGFATEKEKGLLLVEKLDYIQSK 295

Query: 299 LLQNIFFGFSKPLRKLGKWLNEALKRSTGNEGFQIWIEKLKVWLKEQTYAENSLSLIENS 358
           +LQ IF   +KPLRK+GK +N+AL  ++  +  Q   E +KVWLK+ +  +   S ++ +
Sbjct: 296 VLQVIFSTIAKPLRKVGKLINKALSEASQTQEIQDLSEGMKVWLKDLSLFKE--SYLDQT 353

Query: 359 SWDKLRSDQLPDADLPIWIAAQRAVSRYEGILSPVGPXXXXXXXXXAWTGLIPSLPEATI 418
           S + L+   LPD+ LP+ +AAQRAVSRYEG+L+PVGP          W G I    E   
Sbjct: 354 SDNFLKDGFLPDSVLPMQLAAQRAVSRYEGLLTPVGPRAKLFRKLLGWIGFISRDYETPS 413

Query: 419 KSDIDTKDLEGYVRPNFLPRITLANIWAPASRESCNNNLWEITKASFGVLFGKSTLQEPA 478
           +   D+   E Y+RP FL R+TLA+IW PAS+++C N++W+  K S  +L   STLQEPA
Sbjct: 414 QLANDSSSSEPYLRPIFLSRMTLADIWKPASKKACGNDIWKRIKTSISILLSPSTLQEPA 473

Query: 479 FQELILLYTDEADQSKEREKSDM-MPLQLKIFERIPIPDLPVVFPHKKLSFRILDTVRLD 537
           F+ELILLYT +A +  ++ K +    LQL+IFERIPIPDLPV+FPHKKL FRI+DTVRLD
Sbjct: 474 FEELILLYTKDASEKDDKNKDETRSSLQLEIFERIPIPDLPVIFPHKKLYFRIIDTVRLD 533

Query: 538 IATVIGLLAYVVNYKFESLASSPSAFLLDIVAFTALAILVFRVALGYKQTRDRYQLLVNK 597
           IA+++GL AY VNYKFE+++SSPSAF LD++A TAL I   RV LGYKQT DRYQLLVNK
Sbjct: 534 IASILGLTAYFVNYKFENISSSPSAFFLDVIAVTALVIYATRVVLGYKQTWDRYQLLVNK 593

Query: 598 TLYEKTLASGFGSVYFLLDASEQQQYKEALLAYGMLLCRKKYQVSSRVSIRDTCEQFMYE 657
           TLYEKTLASGFGSV+FLLDASEQQQYKEA+L Y ++L   K Q  S   + D CE+FMY+
Sbjct: 594 TLYEKTLASGFGSVHFLLDASEQQQYKEAILTYAIILQAGKNQNMSYKGVGDRCERFMYD 653

Query: 658 KFKAKIEMPIDKAMETLLRLGLVIELPTDGGSRVIALPCSDAYEILKSRWDSLL 711
            FK K+EM ++KA+ TL+RLGLV E   D  +++ A+PC  AY  LK  W SLL
Sbjct: 654 TFKIKVEMRVEKAISTLVRLGLVTETLVDSNTKLQAVPCPQAYISLKELWSSLL 707



>AT3G19340.1 | chr3:6701387-6704071 REVERSE LENGTH=488
          Length = 487

 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 26/265 (9%)

Query: 459 EITKASFGVLFGKSTLQEPAFQELILLYTDEADQSK-EREKSDMMPLQLKIFERIPIPDL 517
           E +K SF     K T+QEP F  +I++Y   + ++  ER       + +K F+ IP+ D+
Sbjct: 240 ENSKLSFKSFLSKLTIQEPTFDRMIVVYRRASSKTNLER------GIYVKHFKNIPMADM 293

Query: 518 PVVFPHKKL-SFRILDTVRLDIATVIGLLAYVVNYKFESLASSP---SAFLLDIVAFTAL 573
            +V P K+      +D V+  I+ V+GL+A + +   E   S P    A L  ++ + A 
Sbjct: 294 EIVLPEKRNPGLTPMDWVKFLISAVVGLVAVLTS--VEMPKSDPWVIIAILSTVLGYCA- 350

Query: 574 AILVFRVALGYKQTRDRYQLLVNKTLYEKTLASGFGSVYFLLDASEQQQYKEALLAYGML 633
                +    ++Q    YQ L+ +++Y+K L SG G++  L D   QQ+ KE ++ + +L
Sbjct: 351 -----KTYFTFQQNMATYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQEVKEVMICFYIL 405

Query: 634 LCRKKYQVSSRVSIRDTCEQFMYEKFKAKIEMPIDKAMETLLRLGLVIELPTDGGSRVIA 693
           + + K  +   + +R  CE+ + E+F A+    ++ A++ L +LG+V     D   R   
Sbjct: 406 MEQGKATLED-LDLR--CEELIKEEFGARCNFDVEDAVQKLEKLGIV---ARDTIGRYYC 459

Query: 694 LPCSDAYEILKSRWDSLLEHKTEQG 718
           +    A EI+ +  + L+  K +QG
Sbjct: 460 MGLKRANEIIGTTTEELV-LKAKQG 483



>AT5G13940.1 | chr5:4490263-4495585 REVERSE LENGTH=810
          Length = 809

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 19/262 (7%)

Query: 459 EITKASFGVLFGKSTLQEPAFQELILLYTDEADQSKEREKSDMMPLQLKIFERIPIPDLP 518
           E  K S   L  K T+QEP F+ +I++Y       KE E++    + +K F+ IP+ D+ 
Sbjct: 525 EKLKLSLSNLMKKITIQEPTFERIIVVYR-RVSGKKESERN----IYVKHFKTIPMADME 579

Query: 519 VVFPHKKL-SFRILDTVRLDIATVIGLLAYVVNYKFESL-ASSPSAFLLDIVAFTALAIL 576
           +V P KK      LD V+  ++  IGL+  V +   +       +A L  +VA+      
Sbjct: 580 IVLPEKKNPGLTPLDWVKFLVSAAIGLVTVVSSVSLKKADIRVIAAILSTVVAYCVKTYF 639

Query: 577 VFRVALGYKQTRDRYQLLVNKTLYEKTLASGFGSVYFLLDASEQQQYKEALLAYGMLLCR 636
            F+  L        YQ L+ +++Y+K L SG G++  L D   QQ+ KE ++++ ML+  
Sbjct: 640 TFQRNLV------DYQSLITRSVYDKQLDSGRGTLLHLCDEVIQQEVKEVIISFFMLI-- 691

Query: 637 KKYQVSSRVSIRDTCEQFMYEKFKAKIEMPIDKAMETLLRLGLVIELPTDGGSRVIALPC 696
           KK   +S+  +    E F+ E+F       +D A+  L +LGLV     D   +   +  
Sbjct: 692 KKGCPTSKEELDMKSEAFIKEEFNESCNFDVDDAITKLEKLGLV---SRDSEDKYRCVEM 748

Query: 697 SDAYEILKSRWDSLLEHKTEQG 718
            +A EI+ +  + ++  K  QG
Sbjct: 749 KEANEIMGTTTEEMV-LKARQG 769



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,645,875
Number of extensions: 526753
Number of successful extensions: 1208
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1199
Number of HSP's successfully gapped: 3
Length of query: 718
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 612
Effective length of database: 8,200,473
Effective search space: 5018689476
Effective search space used: 5018689476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)