Os05g0579900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os05g0579900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.93 | 0.289 | 12 | 0.527 | 1.13 | -0.483 | 0.232 | 0.205 | 0.374 | 6.17 | 5.311 | 4590 | -- | -- |
| 37.97 | 0.287 | 12 | 0.523 | 1.12 | -0.496 | 0.235 | -- | 0.371 | 6.16 | 5.3 | 4590 | -- | -- |
| 38.06 | 0.287 | 12 | 0.525 | 1.13 | -0.489 | -- | 0.193 | 0.374 | 6.18 | 5.3 | 4590 | -- | -- |
| 38.08 | 0.287 | 12 | 0.525 | 1.12 | -0.51 | -- | -- | 0.37 | 6.17 | 5.2 | 4555 | -- | -- |
| 96.25 | 0.459 | 12 | 0.583 | -- | -0.517 | -- | -0.315 | 0.399 | -- | 4.4 | 4849 | -- | -- |
| 41.63 | 0.302 | 12 | 0.702 | 1.15 | -- | 0.239 | -- | 0.388 | 6.1 | -- | -- | -- | -- |
| 41.77 | 0.303 | 12 | 0.705 | 1.15 | -- | -- | -- | 0.387 | 6.11 | -- | -- | -- | -- |
| 96.56 | 0.46 | 12 | 0.59 | -- | -0.495 | -- | -- | 0.393 | -- | 4.4 | 4849 | -- | -- |
| 44.98 | 0.312 | 12 | -- | 1.14 | -0.623 | -- | -- | 0.39 | 6.3 | 5.4 | 4626 | -- | -- |
| 110.87 | 0.492 | 12 | 0.737 | -- | -- | -- | -- | 0.413 | -- | -- | -- | -- | -- |
| 54.86 | 0.346 | 12 | -- | 1.16 | -- | -- | -- | 0.309 | 6.08 | -- | -- | -- | -- |
| 100.82 | 0.468 | 12 | -- | -- | -1.19 | -- | -- | 0.357 | -- | 4.63 | 4883 | -- | -- |
| 125.21 | 0.522 | 12 | -- | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.03 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 3 | 36.13 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 5 | 36.17 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 13 | 36.33 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 17 | 36.45 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 19 | 36.46 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 28 | 36.57 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 29 | 36.59 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 31 | 36.62 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 2 |
| 32 | 36.63 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 51 | 36.73 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 52 | 36.73 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 108 | 36.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 11 |
| 124 | 37.03 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 17 | 7 |
| 141 | 37.07 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 148 | 37.09 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 151 | 37.10 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 163 | 37.13 | temperature | 20.0 | 720 | < th | dose independent | sin | 7 | NA |
| 186 | 37.18 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 5 |
| 188 | 37.19 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 198 | 37.20 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 228 | 37.24 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 244 | 37.28 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 249 | 37.28 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 256 | 37.29 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 271 | 37.31 | temperature | 25.0 | 90 | > th | dose independent | rect. | 20 | 9 |
| 295 | 37.33 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 318 | 37.35 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 386 | 37.41 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 389 | 37.42 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 414 | 37.44 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 1 |
| 417 | 37.44 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 459 | 37.47 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 9 |
| 463 | 37.47 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 467 | 37.48 | radiation | 30.0 | 270 | < th | dose independent | rect. | 22 | 10 |
| 493 | 37.50 | wind | 5.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 501 | 37.50 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 506 | 37.51 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 507 | 37.51 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 517 | 37.52 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 528 | 37.53 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 536 | 37.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 541 | 37.54 | wind | 5.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 558 | 37.54 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 561 | 37.54 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 578 | 37.55 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 13 |
| 580 | 37.56 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 596 | 37.57 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 606 | 37.57 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 11 |
| 621 | 37.59 | wind | 7.0 | 4320 | < th | dose independent | sin | 17 | NA |
| 624 | 37.59 | radiation | 30.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 629 | 37.59 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 11 |
| 643 | 37.60 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 644 | 37.60 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 645 | 37.60 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 647 | 37.60 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 661 | 37.61 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 6 |
| 676 | 37.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 682 | 37.62 | wind | 5.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 712 | 37.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 721 | 37.64 | temperature | 25.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 722 | 37.64 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 737 | 37.65 | humidity | 70.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 746 | 37.66 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 759 | 37.67 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 764 | 37.67 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 14 |
| 768 | 37.67 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 809 | 37.69 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 823 | 37.70 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 829 | 37.70 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 839 | 37.71 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 845 | 37.71 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 887 | 37.73 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 897 | 37.74 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 898 | 37.74 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 10 |
| 906 | 37.74 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 913 | 37.75 | temperature | 25.0 | 90 | > th | dose independent | rect. | 20 | 6 |
| 938 | 37.76 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 952 | 37.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 980 | 37.78 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 8 |