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Os05g0578000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to PEX14 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.013) R2 : 0.588
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.777 (0.0317) R2dC : 0.548 R2C : 0.532
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.19 (0.0274) R2dN8 : 0.056 R2N8 : 0.0401
σ : 0.245
deviance : 27.52
__
_____
C
peak time of C : 22
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.21 0.211 12.5 -0.387 0.509 0.431 -0.253 -0.194 0.176 19.9 18.43 75 -- --
20.34 0.21 12.5 -0.387 0.507 0.428 -0.377 -- 0.174 19.9 17.38 73 -- --
20.35 0.21 12.5 -0.377 0.519 0.416 -- -0.236 0.182 20 18.86 73 -- --
20.75 0.212 12.5 -0.378 0.516 0.404 -- -- 0.173 20.1 17.48 73 -- --
29.63 0.255 12.5 -0.403 -- 0.569 -- -0.262 0.145 -- 12.07 46 -- --
23.25 0.226 12.5 -0.401 0.778 -- -0.244 -- 0.146 22 -- -- -- --
23.49 0.227 12.5 -0.391 0.779 -- -- -- 0.146 22 -- -- -- --
29.44 0.253 12.5 -0.41 -- 0.56 -- -- 0.175 -- 9.503 18 -- --
24.48 0.23 12.5 -- 0.518 0.425 -- -- 0.216 19.9 18.97 78 -- --
60.05 0.362 12.5 -0.382 -- -- -- -- 0.147 -- -- -- -- --
27.52 0.245 12.5 -- 0.777 -- -- -- 0.19 22 -- -- -- --
33.64 0.27 12.5 -- -- 0.561 -- -- 0.21 -- 11.33 15 -- --
63.89 0.373 12.5 -- -- -- -- -- 0.189 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.35 radiation 20.0 90 < th dose dependent rect. 7 9
7 19.66 radiation 10.0 90 < th dose independent rect. 7 9
13 19.91 radiation 10.0 90 < th dose dependent rect. 9 6
22 20.02 radiation 20.0 90 < th dose dependent rect. 5 23
29 20.11 radiation 20.0 90 < th dose dependent rect. 19 23
33 20.15 radiation 20.0 90 < th dose dependent rect. 17 23
58 20.27 humidity 70.0 720 > th dose independent rect. 17 21
65 20.31 radiation 10.0 4320 < th dose dependent rect. 9 1
70 20.34 humidity 70.0 1440 < th dose independent rect. 11 1
71 20.34 humidity 70.0 1440 < th dose independent rect. 6 7
84 20.34 radiation 20.0 90 < th dose dependent no NA NA
92 20.37 humidity 70.0 1440 > th dose independent rect. 19 18
96 20.39 humidity 70.0 1440 < th dose independent rect. 9 4
100 20.40 humidity 70.0 1440 > th dose independent rect. 6 7
117 20.41 radiation 20.0 90 < th dose dependent rect. 11 23
118 20.42 humidity 70.0 1440 > th dose independent rect. 9 4
120 20.43 wind 1.0 43200 > th dose independent rect. 5 2
124 20.43 wind 1.0 43200 < th dose dependent rect. 2 12
125 20.44 wind 1.0 43200 < th dose independent rect. 5 2
127 20.45 humidity 70.0 1440 > th dose independent rect. 11 1
128 20.45 humidity 70.0 720 > th dose independent rect. 7 22
130 20.45 humidity 70.0 720 < th dose independent rect. 18 22
131 20.45 humidity 80.0 1440 < th dose dependent rect. 11 1
139 20.47 humidity 70.0 720 > th dose independent rect. 2 18
140 20.47 humidity 70.0 720 < th dose independent rect. 18 20
141 20.47 wind 1.0 43200 < th dose dependent rect. 5 2
143 20.47 radiation 20.0 90 < th dose dependent rect. 15 23
147 20.49 humidity 70.0 720 > th dose independent rect. 1 23
161 20.51 humidity 70.0 720 > th dose independent rect. 7 17
163 20.51 humidity 80.0 1440 < th dose dependent rect. 6 7
171 20.52 precipitation 0.1 43200 > th dose dependent rect. 19 5
173 20.53 precipitation 0.1 43200 > th dose independent rect. 22 2
176 20.53 radiation 40.0 720 < th dose independent rect. 7 7
177 20.53 humidity 70.0 720 > th dose independent rect. 7 14
179 20.53 radiation 40.0 4320 < th dose independent rect. 16 18
182 20.53 precipitation 0.1 43200 > th dose dependent rect. 22 2
183 20.53 humidity 80.0 1440 < th dose dependent rect. 9 4
186 20.54 precipitation 0.1 43200 < th dose independent rect. 22 2
192 20.54 humidity 70.0 720 > th dose independent rect. 22 23
193 20.54 precipitation 0.1 43200 < th dose dependent rect. 22 2
197 20.55 radiation 40.0 4320 < th dose independent rect. 7 3
208 20.55 wind 1.0 43200 < th dose independent rect. 2 11
209 20.55 radiation 40.0 4320 < th dose independent rect. 22 12
219 20.55 humidity 70.0 720 < th dose independent rect. 15 23
228 20.56 wind 1.0 43200 < th dose dependent rect. 5 5
232 20.57 radiation 40.0 720 < th dose independent rect. 23 15
240 20.58 humidity 70.0 720 > th dose independent sin 1 NA
242 20.58 humidity 70.0 720 > th dose independent no NA NA
243 20.58 humidity 70.0 720 < th dose independent sin 1 NA
246 20.58 radiation 40.0 720 < th dose independent rect. 1 13
256 20.58 radiation 10.0 90 > th dose independent rect. 13 23
257 20.58 radiation 20.0 43200 < th dose dependent rect. 9 1
258 20.58 radiation 20.0 4320 > th dose dependent rect. 6 4
274 20.58 wind 1.0 43200 < th dose dependent rect. 2 17
277 20.59 wind 1.0 43200 > th dose independent rect. 4 6
279 20.59 wind 1.0 43200 < th dose independent rect. 23 11
286 20.59 humidity 70.0 720 < th dose independent rect. 13 23
287 20.59 radiation 40.0 720 < th dose dependent rect. 7 7
289 20.59 radiation 40.0 720 < th dose dependent rect. 1 13
290 20.59 radiation 40.0 720 < th dose dependent rect. 2 17
307 20.60 wind 1.0 43200 < th dose dependent rect. 4 7
309 20.60 radiation 40.0 720 < th dose dependent rect. 23 15
310 20.61 humidity 70.0 720 < th dose independent no NA NA
311 20.61 wind 1.0 43200 < th dose independent rect. 3 8
313 20.61 humidity 70.0 720 < th dose independent rect. 6 14
373 20.61 humidity 50.0 1440 > th dose dependent rect. 11 1
377 20.62 wind 1.0 43200 < th dose independent sin 6 NA
380 20.62 wind 1.0 43200 < th dose independent rect. 5 5
405 20.62 wind 1.0 43200 < th dose dependent rect. 2 15
410 20.63 radiation 10.0 4320 < th dose independent rect. 9 1
411 20.63 radiation 20.0 4320 > th dose independent rect. 6 4
413 20.63 precipitation 0.1 43200 > th dose independent rect. 19 5
442 20.63 radiation 40.0 720 < th dose independent rect. 2 17
455 20.64 humidity 70.0 1440 > th dose independent sin 8 NA
458 20.64 humidity 70.0 1440 < th dose independent sin 8 NA
462 20.64 precipitation 0.1 43200 < th dose independent rect. 19 5
488 20.64 precipitation 0.1 43200 < th dose dependent rect. 19 5
492 20.64 radiation 1.0 30 > th dose dependent rect. 15 21
507 20.65 humidity 70.0 720 > th dose independent rect. 11 23
517 20.65 atmosphere 995.0 43200 < th dose dependent rect. 17 7
527 20.66 humidity 60.0 14400 < th dose independent rect. 11 2
549 20.66 radiation 40.0 720 < th dose dependent sin 4 NA
558 20.66 radiation 1.0 720 > th dose dependent rect. 13 23
585 20.67 humidity 70.0 720 < th dose independent rect. 11 23
614 20.67 radiation 40.0 720 < th dose dependent rect. 16 22
616 20.68 radiation 20.0 4320 > th dose independent sin 10 NA
617 20.68 radiation 20.0 43200 > th dose independent rect. 11 1
644 20.68 radiation 1.0 1440 > th dose dependent rect. 6 6
662 20.68 wind 1.0 43200 < th dose dependent rect. 2 19
665 20.69 radiation 20.0 1440 > th dose independent rect. 9 2
692 20.69 radiation 10.0 1440 > th dose dependent rect. 9 2
693 20.69 precipitation 0.1 43200 > th dose dependent rect. 19 3
710 20.70 atmosphere 995.0 43200 < th dose independent rect. 18 6
729 20.70 humidity 50.0 1440 > th dose dependent rect. 9 4
758 20.71 radiation 10.0 43200 < th dose dependent rect. 7 4
801 20.72 wind 1.0 43200 < th dose independent rect. 15 17
808 20.72 wind 1.0 43200 < th dose independent rect. 13 19
823 20.72 atmosphere 995.0 43200 < th dose dependent rect. 18 5
845 20.73 wind 1.0 43200 > th dose independent rect. 24 8
875 20.73 humidity 60.0 14400 < th dose independent rect. 16 21
877 20.73 radiation 20.0 90 < th dose dependent sin 0 NA
878 20.73 precipitation 0.1 43200 > th dose dependent rect. 16 1
879 20.73 radiation 40.0 1440 < th dose dependent rect. 9 2
886 20.73 radiation 40.0 720 < th dose dependent rect. 1 23
888 20.73 radiation 20.0 90 < th dose dependent rect. 9 23
892 20.74 radiation 40.0 720 < th dose independent sin 4 NA
895 20.74 humidity 60.0 14400 > th dose independent rect. 9 4
930 20.74 radiation 20.0 720 > th dose independent rect. 13 23
933 20.74 wind 1.0 43200 > th dose dependent rect. 5 1
934 20.74 humidity 70.0 14400 < th dose dependent rect. 10 2
938 20.74 radiation 10.0 43200 < th dose dependent rect. 7 6
954 20.75 humidity 60.0 14400 > th dose independent rect. 11 1
977 20.75 radiation 40.0 720 < th dose independent rect. 17 21
978 20.75 radiation 10.0 43200 > th dose independent rect. 15 23
986 20.75 precipitation 0.1 43200 > th dose dependent rect. 16 8
998 20.76 atmosphere 995.0 43200 > th dose independent rect. 18 7