Os05g0569900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0569900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.84 | 0.486 | 5.62 | 1.62 | 0.132 | -0.653 | -1.32 | 0.171 | -0.126 | 15.8 | 24.28 | 1656 | -- | -- |
| 106.89 | 0.482 | 5.62 | 1.68 | 0.135 | -0.645 | -1.33 | -- | -0.109 | 15.8 | 24.3 | 1656 | -- | -- |
| 109.66 | 0.488 | 5.62 | 1.63 | 0.266 | -0.631 | -- | 0.0488 | -0.114 | 19.1 | 24.18 | 1543 | -- | -- |
| 109.66 | 0.488 | 5.63 | 1.65 | 0.263 | -0.627 | -- | -- | -0.112 | 19.1 | 24.2 | 1543 | -- | -- |
| 112.88 | 0.495 | 5.62 | 1.58 | -- | -0.658 | -- | 0.183 | -0.133 | -- | 24.3 | 1711 | -- | -- |
| 121.93 | 0.518 | 5.56 | 1.93 | 0.155 | -- | -1.33 | -- | 0.141 | 16 | -- | -- | -- | -- |
| 124.63 | 0.523 | 5.57 | 1.91 | 0.258 | -- | -- | -- | 0.134 | 19.4 | -- | -- | -- | -- |
| 112.96 | 0.495 | 5.62 | 1.65 | -- | -0.646 | -- | -- | -0.118 | -- | 24.3 | 1711 | -- | -- |
| 121.51 | 0.513 | 5.72 | -- | 0.245 | -1.57 | -- | -- | -0.536 | 19.4 | 19.31 | 47520 | -- | -- |
| 128.19 | 0.529 | 5.56 | 1.91 | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
| 221.11 | 0.696 | 5.62 | -- | 0.243 | -- | -- | -- | -0.0791 | 19.9 | -- | -- | -- | -- |
| 124.75 | 0.52 | 5.7 | -- | -- | -1.53 | -- | -- | -0.496 | -- | 19.34 | 47520 | -- | -- |
| 224.32 | 0.699 | 5.61 | -- | -- | -- | -- | -- | -0.082 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 16 | 105.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 35 | 105.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 57 | 106.19 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 104 | 106.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 113 | 106.63 | temperature | 25 | 1440 | < th | dose independent | sin | 15 | NA |
| 118 | 106.65 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 121 | 106.68 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 132 | 106.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 135 | 106.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 147 | 106.78 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 168 | 106.84 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 174 | 106.87 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 203 | 106.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 210 | 106.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 227 | 106.99 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 261 | 107.06 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 4 |
| 269 | 107.08 | temperature | 25 | 1440 | > th | dose independent | sin | 15 | NA |
| 277 | 107.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 297 | 107.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 308 | 107.16 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 312 | 107.16 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 319 | 107.17 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 344 | 107.21 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 371 | 107.26 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 375 | 107.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 395 | 107.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 420 | 107.34 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 441 | 107.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 471 | 107.40 | temperature | 25 | 1440 | > th | dose independent | rect. | 12 | 14 |
| 508 | 107.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 531 | 107.45 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 600 | 107.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 686 | 107.55 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 697 | 107.57 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 724 | 107.59 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 19 |