Os05g0568600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1645 family protein.
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Os05g0568600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1645 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 366.92 | 0.9 | 7.7 | -2.44 | 6.61 | -3.89 | 3.51 | 0.76 | -0.744 | 6.16 | 51.62 | 840 | 9.51 | -- |
| 367.25 | 0.893 | 7.7 | -2.41 | 6.71 | -3.98 | 3.89 | -- | -0.736 | 6.16 | 50.62 | 836 | 9.37 | -- |
| 375.6 | 0.903 | 7.67 | -2.44 | 7.56 | -4.71 | -- | 4.57 | -0.735 | 6.32 | 47.02 | 826 | 8.27 | -- |
| 403.78 | 0.936 | 7.71 | -2.32 | 6.36 | -3.49 | -- | -- | -0.767 | 6.37 | 59.18 | 850 | 9.41 | -- |
| 709.81 | 1.24 | 7.75 | -3.18 | -- | -4.11 | -- | 5.61 | -0.762 | -- | -136.8 | 1945 | 15.2 | -- |
| 464.87 | 1.01 | 7.74 | -2.43 | 4.67 | -- | 3.44 | -- | -0.734 | 6.68 | -- | -- | -- | -- |
| 494.7 | 1.04 | 7.74 | -2.37 | 4.68 | -- | -- | -- | -0.743 | 6.72 | -- | -- | -- | -- |
| 438.29 | 0.975 | 7.88 | -2.3 | -- | -5.76 | -- | -- | -0.777 | -- | -494.1 | 1558 | 12.2 | -- |
| 543.05 | 1.09 | 7.66 | -- | 6.32 | -3.4 | -- | -- | -0.584 | 6.54 | 66.46 | 814 | 8.93 | -- |
| 1640.62 | 1.89 | 7.84 | -2.26 | -- | -- | -- | -- | -0.651 | -- | -- | -- | -- | -- |
| 642.99 | 1.19 | 7.68 | -- | 4.66 | -- | -- | -- | -0.479 | 6.75 | -- | -- | -- | -- |
| 590.26 | 1.13 | 7.8 | -- | -- | -5.68 | -- | -- | -0.503 | -- | -527.3 | 1559 | 12.2 | -- |
| 1775.89 | 1.97 | 7.78 | -- | -- | -- | -- | -- | -0.399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 362.47 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 3 | 363.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 4 | 363.53 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 7 | 363.80 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 13 | 364.81 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 12 |
| 16 | 365.05 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 17 |
| 21 | 365.77 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 49 | 368.42 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 68 | 370.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 69 | 370.08 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 105 | 371.81 | humidity | 60 | 720 | > th | dose dependent | sin | 15 | NA |
| 115 | 372.07 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 202 | 373.87 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 213 | 374.29 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 214 | 374.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 222 | 374.60 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 11 |
| 250 | 374.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 336 | 376.14 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 337 | 376.15 | humidity | 80 | 720 | < th | dose independent | rect. | 16 | 5 |
| 368 | 376.66 | radiation | 1 | 1440 | < th | dose independent | sin | 19 | NA |
| 392 | 377.09 | radiation | 1 | 1440 | > th | dose independent | sin | 19 | NA |
| 480 | 378.35 | humidity | 80 | 720 | > th | dose independent | rect. | 12 | 10 |
| 500 | 378.63 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 4 |
| 517 | 378.92 | radiation | 1 | 1440 | < th | dose dependent | sin | 20 | NA |
| 530 | 379.16 | humidity | 80 | 720 | > th | dose independent | rect. | 14 | 8 |
| 556 | 379.66 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 21 |
| 586 | 380.19 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 613 | 380.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 614 | 380.84 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 730 | 382.86 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 738 | 383.01 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 764 | 383.42 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 11 |
| 837 | 384.12 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 991 | 385.37 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |