Os05g0555300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ferredoxin domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0555300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ferredoxin domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.66 | 0.437 | 13.3 | -1.16 | 1.3 | -1.17 | 1.19 | 0.155 | -0.595 | 9.06 | 47.81 | 1271 | -- | -- |
| 85.38 | 0.43 | 13.3 | -1.15 | 1.55 | -1.42 | 1.25 | -- | -0.585 | 9.16 | 44.5 | 1058 | -- | -- |
| 90.19 | 0.442 | 13.3 | -1.19 | 1.5 | -1.39 | -- | 0.797 | -0.561 | 9.18 | 42.65 | 1073 | -- | -- |
| 90.87 | 0.444 | 13.3 | -1.11 | 1.51 | -1.37 | -- | -- | -0.584 | 9.16 | 44.05 | 1076 | -- | -- |
| 176.9 | 0.619 | 13.3 | -1.11 | -- | -1.07 | -- | 0.312 | -0.591 | -- | 52.99 | 1435 | -- | -- |
| 115.9 | 0.505 | 13.3 | -1.06 | 1.24 | -- | 1.1 | -- | -0.545 | 8.48 | -- | -- | -- | -- |
| 119.78 | 0.513 | 13.3 | -1.03 | 1.23 | -- | -- | -- | -0.546 | 8.45 | -- | -- | -- | -- |
| 177.06 | 0.62 | 13.3 | -1.07 | -- | -1.05 | -- | -- | -0.583 | -- | 53.48 | 1436 | -- | -- |
| 123.02 | 0.517 | 13.3 | -- | 1.47 | -1.26 | -- | -- | -0.461 | 9.19 | 43.3 | 1094 | -- | -- |
| 204.79 | 0.669 | 13.3 | -1.02 | -- | -- | -- | -- | -0.534 | -- | -- | -- | -- | -- |
| 147.77 | 0.569 | 13.3 | -- | 1.23 | -- | -- | -- | -0.431 | 8.51 | -- | -- | -- | -- |
| 204.87 | 0.667 | 13.3 | -- | -- | -1.39 | -- | -- | -0.577 | -- | 72 | 1435 | -- | -- |
| 232.48 | 0.712 | 13.3 | -- | -- | -- | -- | -- | -0.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.55 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 4 | 80.65 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 40 | 82.00 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 41 | 82.00 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 50 | 82.27 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 73 | 83.00 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 76 | 83.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 83 | 83.13 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 109 | 83.96 | humidity | 90 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 155 | 85.07 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 204 | 86.45 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 207 | 86.53 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 8 |
| 239 | 87.21 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 246 | 87.26 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 14 |
| 249 | 87.27 | humidity | 70 | 1440 | > th | dose dependent | sin | 0 | NA |
| 305 | 87.64 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 330 | 87.75 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 389 | 88.01 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 494 | 88.35 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 558 | 88.53 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 3 |
| 585 | 88.60 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 603 | 88.61 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 606 | 88.62 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 697 | 88.81 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 709 | 88.85 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 749 | 88.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 755 | 88.94 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 769 | 88.97 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 779 | 88.97 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 808 | 89.02 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 815 | 89.03 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 993 | 89.46 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 996 | 89.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |