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Os05g0550300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Lipid transfer protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.57 (0.0795) R2 : 0.447
β1 : -2.31 (0.375) R2dD : 0.0927 R2D : -0.115
β2 : 2.7 (0.228) R2dC : 0.243 R2C : -0.0979
β3 : 6.08 (0.376) R2dE : 0.517 R2E : 0.102
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -10.6 (1.54) R2dD*E : 0.112 R2D*E : 0.0392
γ1 : -0.0101 (0.178) R2dN8 : 1.65e-05 R2N8 : -0.00211
σ : 1.37
deviance : 859.46
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C
peak time of C : 5.77
E
wheather : temperature
threshold : 15.98
memory length : 338
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 23.1
open length of G : 22.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
852.68 1.37 7.61 -2.57 2.72 6.07 -2.05 -12.4 -0.0991 5.59 16.25 338 23.2 22.1
944.37 1.43 7.43 -0.735 2.6 6.3 1.12 -- 0.281 5.71 14.67 316 23.3 22.5
859.46 1.37 7.57 -2.31 2.7 6.08 -- -10.6 -0.0101 5.77 15.98 338 23.1 22.3
943.16 1.43 7.41 -0.67 2.65 6.07 -- -- 0.366 5.48 12.48 329 23.2 22.4
1112.47 1.55 7.49 -1.3 -- 4.25 -- -9.14 0.44 -- 2.607 124 22.2 23.7
1352.5 1.72 7.2 0.658 1.12 -- 0.3 -- 1.28 8.77 -- -- -- --
1352.8 1.72 7.2 0.668 1.12 -- -- -- 1.28 8.77 -- -- -- --
1169.46 1.6 7.36 -0.0927 -- 4.18 -- -- 0.731 -- 0.4856 140 23.9 23.7
949.62 1.44 7.36 -- 2.67 6.05 -- -- 0.545 5.4 11.11 316 23.2 22.5
1423.47 1.76 7.23 0.669 -- -- -- -- 1.29 -- -- -- -- --
1364.54 1.73 7.22 -- 1.12 -- -- -- 1.21 8.72 -- -- -- --
1095.11 1.54 7.38 -- -- 4.13 -- -- 0.599 -- -19.35 1412 0.48 24
1435.28 1.77 7.25 -- -- -- -- -- 1.22 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 867.01 temperature 15 270 > th dose dependent rect. 24 22
2 869.04 wind 5 43200 > th dose independent rect. 13 3
7 875.26 wind 5 43200 < th dose independent rect. 13 3
14 879.43 temperature 15 720 > th dose dependent rect. 17 19
18 881.69 temperature 30 270 < th dose dependent rect. 4 23
20 882.38 temperature 30 720 < th dose dependent rect. 18 21
22 882.61 wind 3 43200 > th dose dependent rect. 13 2
24 882.89 wind 5 43200 < th dose independent rect. 11 6
27 883.74 temperature 15 720 > th dose dependent rect. 17 21
33 884.75 wind 3 43200 > th dose dependent rect. 12 4
49 887.03 temperature 20 270 > th dose dependent rect. 12 23
61 888.38 radiation 1 14400 < th dose dependent rect. 2 3
70 889.55 radiation 1 14400 < th dose dependent rect. 4 1
103 893.12 wind 5 43200 > th dose independent rect. 13 9
132 895.08 wind 5 43200 < th dose independent rect. 13 9
134 895.24 wind 5 43200 < th dose independent rect. 11 10
143 895.84 temperature 30 720 < th dose dependent rect. 17 17
145 895.95 temperature 20 1440 > th dose dependent rect. 15 15
154 896.27 wind 9 43200 < th dose dependent rect. 13 1
161 896.65 temperature 20 1440 > th dose dependent rect. 11 21
162 896.74 temperature 30 720 < th dose dependent rect. 15 20
170 897.02 temperature 20 1440 > th dose dependent rect. 13 19
208 898.24 temperature 20 1440 > th dose dependent sin 14 NA
215 898.43 temperature 30 720 < th dose dependent rect. 13 22
234 898.88 temperature 30 720 < th dose dependent rect. 11 23
237 899.06 wind 9 43200 < th dose dependent rect. 11 4
255 899.52 temperature 15 720 > th dose dependent rect. 20 23
294 900.52 temperature 20 1440 > th dose dependent rect. 24 23
295 900.56 temperature 20 1440 > th dose dependent no NA NA
306 900.90 radiation 30 14400 < th dose independent rect. 16 13
334 901.53 temperature 20 270 > th dose dependent no NA NA
374 902.47 wind 3 43200 > th dose dependent rect. 10 11
375 902.50 radiation 30 14400 < th dose independent rect. 16 8
379 902.63 temperature 30 720 < th dose dependent no NA NA
380 902.64 radiation 30 14400 < th dose independent rect. 16 4
407 903.23 temperature 30 720 < th dose dependent rect. 22 23
428 903.75 radiation 30 14400 < th dose independent rect. 16 1
514 905.86 temperature 20 1440 > th dose dependent rect. 16 7
545 906.76 temperature 30 720 < th dose dependent rect. 1 23
547 906.86 wind 5 43200 < th dose independent sin 20 NA
593 908.09 temperature 20 1440 > th dose dependent sin 5 NA
594 908.10 temperature 20 1440 > th dose dependent rect. 1 13
601 908.25 temperature 30 720 < th dose dependent rect. 9 23
606 908.41 wind 5 43200 > th dose independent sin 19 NA
751 912.29 wind 3 43200 > th dose dependent sin 20 NA
860 915.10 temperature 20 1440 > th dose dependent rect. 21 1
945 917.99 temperature 30 720 < th dose dependent sin 10 NA
992 919.54 humidity 80 43200 < th dose independent rect. 21 1