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Os05g0543400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Farnesyl diphosphate synthase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.15 (0.0164) R2 : 0.456
β1 : -0.75 (0.06) R2dD : 0.193 R2D : 0.199
β2 : 0.587 (0.0425) R2dC : 0.229 R2C : 0.221
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.127 (0.035) R2dN8 : 0.0211 R2N8 : 0.0388
σ : 0.308
deviance : 43.35
__
_____
C
peak time of C : 7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.3 0.279 9.23 -1.37 0.607 -0.506 0.0438 2.31 -0.0809 7.42 84.61 1087 -- --
39.11 0.291 9.18 -0.995 0.578 -0.518 0.163 -- 0.0161 7.23 81.63 5554 -- --
35.3 0.277 9.23 -1.36 0.611 -0.507 -- 2.32 -0.0803 7.42 94.1 1068 -- --
39.16 0.291 9.18 -0.988 0.577 -0.503 -- -- 0.0183 7.11 87.16 5709 -- --
53.39 0.34 9.25 -1.36 -- -0.507 -- 2.15 -0.0745 -- 107.8 1318 -- --
43.32 0.309 9.15 -0.752 0.586 -- 0.116 -- 0.128 7.04 -- -- -- --
43.35 0.308 9.15 -0.75 0.587 -- -- -- 0.127 7 -- -- -- --
56.8 0.351 9.19 -0.992 -- -0.527 -- -- 0.024 -- 112.9 5707 -- --
58.11 0.355 9.14 -- 0.583 -0.0495 -- -- 0.202 7.09 68.29 1921 -- --
61.46 0.366 9.17 -0.738 -- -- -- -- 0.138 -- -- -- -- --
58.16 0.357 9.13 -- 0.579 -- -- -- 0.211 7.08 -- -- -- --
72.21 0.396 9.13 -- -- 0.472 -- -- 0.275 -- 117.2 391 -- --
75.82 0.406 9.15 -- -- -- -- -- 0.22 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.96 humidity 70 720 > th dose dependent rect. 18 1
3 34.33 radiation 1 720 < th dose dependent rect. 17 2
4 34.40 temperature 15 720 > th dose dependent rect. 11 20
8 34.57 temperature 15 720 > th dose dependent rect. 19 4
10 34.64 humidity 90 720 < th dose independent rect. 11 11
12 34.67 humidity 90 720 < th dose independent rect. 10 13
16 34.71 humidity 70 14400 < th dose dependent rect. 19 13
30 34.87 temperature 10 720 > th dose dependent rect. 11 13
31 34.88 temperature 10 720 > th dose dependent rect. 5 19
48 34.99 humidity 70 14400 < th dose dependent rect. 19 3
60 35.02 humidity 70 14400 < th dose dependent rect. 19 1
63 35.02 temperature 10 720 > th dose dependent rect. 12 11
90 35.14 humidity 90 720 < th dose dependent rect. 19 2
111 35.21 wind 9 43200 > th dose dependent rect. 19 5
112 35.21 wind 9 43200 > th dose dependent rect. 19 9
120 35.23 wind 9 43200 > th dose dependent rect. 20 3
132 35.26 temperature 15 720 > th dose dependent sin 16 NA
137 35.28 wind 9 43200 > th dose independent rect. 19 5
142 35.29 temperature 30 720 < th dose dependent rect. 18 1
149 35.30 wind 9 43200 < th dose independent rect. 18 6
155 35.32 wind 9 43200 > th dose independent rect. 19 9
161 35.34 wind 9 43200 < th dose independent rect. 18 10
162 35.34 humidity 90 720 > th dose independent rect. 10 11
166 35.34 humidity 50 720 > th dose dependent rect. 17 10
172 35.35 wind 9 43200 > th dose dependent rect. 17 11
184 35.37 wind 9 43200 > th dose dependent rect. 17 8
198 35.40 humidity 60 43200 > th dose independent rect. 9 1
199 35.40 humidity 60 14400 < th dose independent rect. 18 2
241 35.46 humidity 80 43200 < th dose dependent rect. 22 1
254 35.49 humidity 90 720 > th dose dependent rect. 10 10
274 35.53 humidity 60 43200 < th dose independent rect. 9 1
276 35.53 humidity 60 14400 < th dose dependent rect. 17 16
278 35.54 humidity 50 43200 < th dose independent rect. 14 3
293 35.56 humidity 90 43200 < th dose independent rect. 6 1
296 35.56 radiation 1 720 < th dose dependent rect. 17 10
299 35.57 humidity 90 720 < th dose independent sin 20 NA
300 35.57 humidity 60 14400 > th dose independent rect. 18 2
307 35.58 radiation 10 14400 < th dose independent rect. 1 4
311 35.59 humidity 90 43200 > th dose independent rect. 6 1
313 35.59 wind 1 43200 > th dose dependent rect. 17 13
315 35.60 radiation 10 14400 < th dose independent rect. 19 10
325 35.61 humidity 60 14400 > th dose independent rect. 18 11
328 35.61 wind 1 43200 > th dose dependent rect. 23 20
329 35.61 temperature 30 720 < th dose dependent rect. 20 23
330 35.62 humidity 80 43200 > th dose independent rect. 23 1
341 35.63 temperature 30 720 < th dose dependent no NA NA
346 35.63 wind 9 43200 < th dose dependent rect. 17 13
348 35.63 wind 7 43200 < th dose dependent rect. 23 20
351 35.64 wind 9 43200 < th dose independent rect. 19 2
353 35.64 temperature 10 720 > th dose dependent no NA NA
359 35.64 wind 1 43200 > th dose dependent rect. 15 17
366 35.64 temperature 30 720 < th dose dependent rect. 1 23
367 35.64 temperature 30 720 < th dose dependent rect. 11 23
369 35.64 temperature 30 720 < th dose dependent rect. 17 23
373 35.65 wind 7 43200 < th dose independent rect. 15 18
374 35.65 wind 9 43200 < th dose dependent rect. 24 1
376 35.65 radiation 20 14400 < th dose dependent rect. 1 4
387 35.65 wind 9 43200 < th dose dependent rect. 15 15
393 35.65 temperature 30 720 < th dose dependent rect. 22 23
396 35.66 wind 7 43200 > th dose independent rect. 15 18
406 35.66 temperature 30 720 < th dose dependent rect. 15 23
408 35.67 humidity 50 43200 > th dose independent rect. 14 3
413 35.67 wind 1 43200 > th dose dependent sin 12 NA
424 35.68 radiation 30 4320 < th dose independent rect. 16 16
435 35.68 wind 1 43200 > th dose dependent rect. 10 22
451 35.69 wind 5 43200 > th dose dependent rect. 15 18
457 35.69 wind 1 43200 > th dose dependent rect. 15 21
460 35.69 temperature 30 720 < th dose dependent rect. 4 23
475 35.70 wind 9 43200 < th dose dependent rect. 11 21
480 35.70 wind 1 43200 > th dose dependent rect. 17 23
489 35.71 wind 9 43200 < th dose dependent sin 12 NA
492 35.71 humidity 80 43200 > th dose dependent rect. 8 2
512 35.71 temperature 30 720 < th dose dependent rect. 6 23
553 35.73 wind 9 43200 < th dose dependent rect. 15 21
558 35.73 wind 1 43200 > th dose dependent rect. 7 23
571 35.74 wind 1 43200 > th dose dependent no NA NA
572 35.74 wind 1 43200 > th dose dependent rect. 24 1
601 35.74 wind 9 43200 < th dose dependent rect. 17 23
607 35.75 humidity 80 43200 < th dose independent rect. 23 1
609 35.75 wind 9 43200 < th dose independent rect. 17 14
634 35.75 wind 1 43200 > th dose dependent rect. 4 23
668 35.76 wind 9 43200 < th dose dependent rect. 7 23
677 35.77 wind 7 43200 > th dose dependent sin 12 NA
678 35.77 wind 9 43200 < th dose dependent no NA NA
708 35.77 temperature 15 720 > th dose dependent rect. 18 23
710 35.78 humidity 60 43200 > th dose independent rect. 7 4
736 35.78 wind 9 43200 < th dose dependent rect. 4 23
772 35.80 wind 9 43200 > th dose independent rect. 19 2
775 35.80 temperature 10 1440 > th dose dependent rect. 7 12
835 35.82 humidity 60 43200 < th dose independent rect. 7 4
868 35.83 humidity 50 43200 < th dose independent rect. 15 1
873 35.83 humidity 60 43200 < th dose independent rect. 5 6
876 35.83 temperature 10 1440 > th dose dependent sin 23 NA
953 35.85 radiation 30 14400 < th dose independent rect. 1 7
993 35.86 radiation 30 14400 < th dose independent rect. 19 13