Os05g0542200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Epoxide hydrolase family protein.
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Os05g0542200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Epoxide hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.38 | 0.526 | 12 | 0.0793 | 1.38 | 0.757 | 1.99 | -3.42 | 0.7 | 8.85 | 19.96 | 1452 | -- | -- |
| 142.43 | 0.556 | 12.1 | -0.122 | 0.999 | 1.02 | 1.59 | -- | 0.547 | 9.53 | 39.86 | 924 | -- | -- |
| 134.25 | 0.54 | 12 | 0.123 | 1.38 | 0.783 | -- | -3.77 | 0.667 | 9.17 | 19.87 | 1611 | -- | -- |
| 152.94 | 0.576 | 12.1 | -0.241 | 0.949 | 1.31 | -- | -- | 0.562 | 9.18 | 39.83 | 955 | -- | -- |
| 175 | 0.616 | 12.1 | 0.0911 | -- | 1.42 | -- | -2.93 | 0.715 | -- | 19.98 | 925 | -- | -- |
| 171 | 0.613 | 12.1 | -0.24 | 1.38 | -- | 2.01 | -- | 0.446 | 8.86 | -- | -- | -- | -- |
| 184.65 | 0.636 | 12.1 | -0.174 | 1.38 | -- | -- | -- | 0.446 | 8.76 | -- | -- | -- | -- |
| 172.69 | 0.612 | 12 | 0.133 | -- | 1.75 | -- | -- | 0.736 | -- | 14.03 | 951 | -- | -- |
| 152.94 | 0.576 | 12 | -- | 0.947 | 1.36 | -- | -- | 0.624 | 9.09 | 39.36 | 982 | -- | -- |
| 292.38 | 0.799 | 12.1 | -0.172 | -- | -- | -- | -- | 0.457 | -- | -- | -- | -- | -- |
| 185.45 | 0.637 | 12.1 | -- | 1.38 | -- | -- | -- | 0.465 | 8.77 | -- | -- | -- | -- |
| 173.13 | 0.613 | 12 | -- | -- | 1.75 | -- | -- | 0.731 | -- | 14.03 | 949 | -- | -- |
| 293.16 | 0.799 | 12.1 | -- | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.82 | radiation | 20 | 720 | < th | dose independent | rect. | 3 | 20 |
| 4 | 121.54 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 22 | 122.25 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 40 | 124.76 | radiation | 20 | 720 | < th | dose independent | rect. | 20 | 20 |
| 44 | 125.06 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 51 | 125.36 | radiation | 20 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 80 | 125.49 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 94 | 125.50 | radiation | 20 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 95 | 125.51 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 135 | 125.64 | radiation | 10 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 143 | 125.82 | radiation | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 171 | 126.03 | radiation | 40 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 173 | 126.13 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 175 | 126.17 | radiation | 40 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 177 | 126.18 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 207 | 126.39 | radiation | 40 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 226 | 126.75 | radiation | 40 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 229 | 126.80 | radiation | 20 | 1440 | < th | dose independent | sin | 1 | NA |
| 233 | 126.83 | radiation | 20 | 720 | < th | dose independent | sin | 22 | NA |
| 243 | 126.96 | radiation | 40 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 245 | 126.98 | radiation | 10 | 1440 | < th | dose dependent | rect. | 5 | 13 |
| 248 | 127.00 | radiation | 10 | 1440 | < th | dose dependent | rect. | 20 | 22 |
| 255 | 127.06 | radiation | 10 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 258 | 127.07 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 262 | 127.08 | radiation | 10 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 291 | 127.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 292 | 127.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 293 | 127.19 | radiation | 10 | 1440 | < th | dose dependent | no | NA | NA |
| 319 | 127.24 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 321 | 127.25 | radiation | 10 | 1440 | < th | dose dependent | sin | 1 | NA |
| 408 | 127.45 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 511 | 128.19 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 624 | 128.54 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 648 | 128.73 | radiation | 20 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 668 | 128.78 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 688 | 128.85 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 698 | 128.92 | radiation | 1 | 1440 | > th | dose dependent | sin | 12 | NA |
| 796 | 129.40 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 841 | 129.65 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 8 |
| 855 | 129.71 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 857 | 129.73 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 859 | 129.73 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 874 | 129.92 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 883 | 129.97 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 891 | 129.99 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 903 | 130.06 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 971 | 130.38 | radiation | 40 | 1440 | > th | dose dependent | sin | 12 | NA |