BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0542200 Os05g0542200|AK071306
(400 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0542200 Epoxide hydrolase family protein 786 0.0
Os02g0299300 Esterase/lipase/thioesterase domain containing... 367 e-101
AK108196 92 5e-19
>Os05g0542200 Epoxide hydrolase family protein
Length = 400
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/400 (95%), Positives = 380/400 (95%)
Query: 1 MPYCEVDRYQNGDEWDGVRLFYRRFGRGATKVLLVIGLAGTHDSWGPQIKGLTGSLEPXX 60
MPYCEVDRYQNGDEWDGVRLFYRRFGRGATKVLLVIGLAGTHDSWGPQIKGLTGSLEP
Sbjct: 1 MPYCEVDRYQNGDEWDGVRLFYRRFGRGATKVLLVIGLAGTHDSWGPQIKGLTGSLEPAA 60
Query: 61 XXXXXXXXXXXXXXXXXXIEVCCFDNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGWK 120
IEVCCFDNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGWK
Sbjct: 61 DDEESGDAAAAEGDDGDGIEVCCFDNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGWK 120
Query: 121 KAHVFGHSMGAMISCKLAAMAPHRICSLALLNVTGGGFQCFPKLDGQMLSLAFRFLRART 180
KAHVFGHSMGAMISCKLAAMAPHRICSLALLNVTGGGFQCFPKLDGQMLSLAFRFLRART
Sbjct: 121 KAHVFGHSMGAMISCKLAAMAPHRICSLALLNVTGGGFQCFPKLDGQMLSLAFRFLRART 180
Query: 181 PEERALVDLETHYTKEYLDEKVGSCTRRTILYQEYVKGISSTGMQSNCGFEGQVNACWTH 240
PEERALVDLETHYTKEYLDEKVGSCTRRTILYQEYVKGISSTGMQSNCGFEGQVNACWTH
Sbjct: 181 PEERALVDLETHYTKEYLDEKVGSCTRRTILYQEYVKGISSTGMQSNCGFEGQVNACWTH 240
Query: 241 NMTTKELDTIRSAGFLVSVIHGRSDIIAQLCHARRLAERLIPVARMVELHGAHLVSHERP 300
NMTTKELDTIRSAGFLVSVIHGRSDIIAQLCHARRLAERLIPVARMVELHGAHLVSHERP
Sbjct: 241 NMTTKELDTIRSAGFLVSVIHGRSDIIAQLCHARRLAERLIPVARMVELHGAHLVSHERP 300
Query: 301 EEVNNALMELIKATKSMMKPEEWSSQPENSSETGALISARPVSVTIRTDDGGNAAIAVYN 360
EEVNNALMELIKATKSMMKPEEWSSQPENSSETGALISARPVSVTIRTDDGGNAAIAVYN
Sbjct: 301 EEVNNALMELIKATKSMMKPEEWSSQPENSSETGALISARPVSVTIRTDDGGNAAIAVYN 360
Query: 361 LLAKLQLSFLYVIGVILMGFEHMRNIVKVMKPVRVAAIES 400
LLAKLQLSFLYVIGVILMGFEHMRNIVKVMKPVRVAAIES
Sbjct: 361 LLAKLQLSFLYVIGVILMGFEHMRNIVKVMKPVRVAAIES 400
>Os02g0299300 Esterase/lipase/thioesterase domain containing protein
Length = 289
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/292 (63%), Positives = 227/292 (77%), Gaps = 6/292 (2%)
Query: 106 MARDALALMDHLGWKKAHVFGHSMGAMISCKLAAMAPHRICSLALLNVTGGGFQCFPKLD 165
MA+DALALMDHLGW+KAHVFGHSMG+MI+ KLAA+AP R+ SLALLN TGGG+QC PK+D
Sbjct: 1 MAKDALALMDHLGWRKAHVFGHSMGSMIASKLAAIAPERVASLALLNTTGGGYQCIPKID 60
Query: 166 GQMLSLAFRFLRARTPEERALVDLETHYTKEYLDEKVGSCTRRTILYQEYVKGISSTGMQ 225
Q +SLA RFLRARTPE+RA VDL+ HYT+EYLDE VGS TRR +LYQEYVKG+SS GMQ
Sbjct: 61 WQTISLACRFLRARTPEQRAGVDLDVHYTREYLDEIVGSNTRRQMLYQEYVKGLSSCGMQ 120
Query: 226 SNCGFEGQVNACWTHNMTTKELDTIRSAGFLVSVIHGRSDIIAQLCHARRLAERLIPVAR 285
S G+EGQ+NACWTH +T KELD IRS+GFL+ VIHGR D++AQL HARRLAE+L P A+
Sbjct: 121 SRHGYEGQLNACWTHKLTQKELDRIRSSGFLILVIHGRDDVVAQLYHARRLAEKLQPAAK 180
Query: 286 MVELHGAHLVSHERPEEVNNALMELIKATKSMMKPEEWSSQPENSSETGALISARPVSVT 345
+VELHG HLVSHER EVN +LME+IKA+KS EWS+ P+ S + L++ +
Sbjct: 181 LVELHGGHLVSHERTAEVNMSLMEMIKASKSNTDQGEWSNLPKKSDDL--LLAGSDSRLA 238
Query: 346 IRTDDGGNAAIAVYNLLAKLQLSFLYVIGVILMGFEHMRNIVKVMKPVRVAA 397
R + I +YNLL KLQL L+ GV + EH R +++V+KPVRV+A
Sbjct: 239 KRECN----IIVIYNLLGKLQLILLFFFGVFYIILEHARRVLRVLKPVRVSA 286
>AK108196
Length = 352
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 133/303 (43%), Gaps = 34/303 (11%)
Query: 16 DGVRLFYRRFGRGATKVLLVIGLAGTHDSWGPQIKGLTGSLEPXXXXXXXXXXXXXXXXX 75
DG +++Y G+GA KV V+GL T W PQ+ L
Sbjct: 63 DGFKVYYEVHGKGAIKVAFVMGLNNTSFGWLPQVDHLA---------------------R 101
Query: 76 XXXIEVCCFDNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGW---KKAHVFGHSMGAM 132
FDNRGVG S +Y T MA D +++ +GW + HV G SMG M
Sbjct: 102 DERYSCLVFDNRGVGNSET--PAGWYKTSDMAVDTFEVLEQVGWTGERNVHVAGVSMGGM 159
Query: 133 ISCKLAAMAPHRICSLALLNVTGGGFQCFPKLDGQMLS--LAFRFLRARTPEERALVDLE 190
I+ ++A P + SL L++ G P L+ LA R L + + R +
Sbjct: 160 IALEMARQRPELLASLTLISTAPGKRFHTPTYGLTSLARVLAGRTLGFDSEQYRLNRLIS 219
Query: 191 THYTKEYL---DEKVGSCTRRTILYQEYVKGISSTGMQSNCGFEGQVNACWTHNMTTKEL 247
T + + +L EK S T R +LY + + T Q G Q+ A TH + +L
Sbjct: 220 TLFPESWLAEKSEKDASRTNREVLYDMFKWRYAFTIRQQLHGAVSQMKAAVTHYIPDADL 279
Query: 248 DTIRSAGFLVSVIHGRSDIIAQLCHARRLAERLIPVARMVELHGA-HLVSHERPEEVNNA 306
+ I +A +S + G +D + ++ L ++L P A E A H + ++ ++V NA
Sbjct: 280 ERIDTAVPKISTLTGDTDFLVDPRNSAYLRDKL-PSADFHEFPNAGHALGNQIADQV-NA 337
Query: 307 LME 309
++E
Sbjct: 338 ILE 340
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,615,312
Number of extensions: 480058
Number of successful extensions: 1073
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1070
Number of HSP's successfully gapped: 3
Length of query: 400
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 297
Effective length of database: 11,657,759
Effective search space: 3462354423
Effective search space used: 3462354423
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)