Os05g0539600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os05g0539600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.73 | 0.505 | 5.44 | 2.22 | 0.0101 | -1.04 | -1.12 | 3.13 | 0.438 | 8.04 | 25.56 | 1342 | -- | -- |
| 119.51 | 0.509 | 5.53 | 1.38 | 0.0286 | -0.746 | 1.19 | -- | 0.279 | 19.3 | 25.34 | 1250 | -- | -- |
| 119.47 | 0.509 | 5.43 | 2.21 | 0.00852 | -1.05 | -- | 3.25 | 0.441 | 8.63 | 25.6 | 1340 | -- | -- |
| 122.81 | 0.516 | 5.54 | 1.35 | 0.0123 | -0.706 | -- | -- | 0.213 | 8.53 | 26.11 | 1331 | -- | -- |
| 119.48 | 0.509 | 5.43 | 2.23 | -- | -1.05 | -- | 3.29 | 0.443 | -- | 25.64 | 1340 | -- | -- |
| 140.74 | 0.556 | 5.55 | 1.14 | 0.0267 | -- | -1.17 | -- | 0.169 | 8.01 | -- | -- | -- | -- |
| 142.99 | 0.56 | 5.55 | 1.12 | 0.174 | -- | -- | -- | 0.175 | 13.7 | -- | -- | -- | -- |
| 122.83 | 0.516 | 5.54 | 1.34 | -- | -0.702 | -- | -- | 0.208 | -- | 26.2 | 1326 | -- | -- |
| 166.73 | 0.601 | 5.59 | -- | 0.0254 | -0.456 | -- | -- | -0.0142 | 8.63 | 28.61 | 1231 | -- | -- |
| 144.83 | 0.562 | 5.55 | 1.11 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 175.78 | 0.62 | 5.58 | -- | 0.154 | -- | -- | -- | 0.0504 | 13.5 | -- | -- | -- | -- |
| 166.77 | 0.601 | 5.6 | -- | -- | -0.457 | -- | -- | -0.014 | -- | 28.6 | 1230 | -- | -- |
| 177.23 | 0.621 | 5.58 | -- | -- | -- | -- | -- | 0.0478 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 10 |
| 29 | 115.32 | temperature | 25 | 1440 | > th | dose dependent | sin | 2 | NA |
| 157 | 116.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 166 | 116.21 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 175 | 116.25 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 180 | 116.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 187 | 116.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 194 | 116.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 203 | 116.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 210 | 116.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 218 | 116.53 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 232 | 116.66 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 241 | 116.75 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 273 | 117.05 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 286 | 117.20 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 301 | 117.29 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 329 | 117.54 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 341 | 117.66 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 350 | 117.72 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 353 | 117.75 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 370 | 117.84 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 379 | 117.91 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 380 | 117.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 388 | 117.94 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 392 | 117.95 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 418 | 118.02 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 420 | 118.04 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 431 | 118.10 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 17 |
| 432 | 118.10 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 17 |
| 438 | 118.15 | wind | 7 | 43200 | > th | dose independent | rect. | 7 | 18 |
| 444 | 118.16 | wind | 7 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 452 | 118.17 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 493 | 118.27 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 498 | 118.29 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 521 | 118.32 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 525 | 118.33 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 581 | 118.40 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 586 | 118.41 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 597 | 118.43 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 606 | 118.45 | radiation | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 607 | 118.46 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 613 | 118.47 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 618 | 118.47 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 632 | 118.49 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 634 | 118.50 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 644 | 118.50 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 666 | 118.54 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 670 | 118.56 | wind | 7 | 43200 | > th | dose dependent | sin | 16 | NA |
| 694 | 118.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 714 | 118.62 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 721 | 118.63 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 729 | 118.64 | wind | 7 | 43200 | > th | dose independent | sin | 18 | NA |
| 776 | 118.68 | wind | 7 | 43200 | < th | dose independent | sin | 18 | NA |
| 795 | 118.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 853 | 118.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 861 | 118.84 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 866 | 118.84 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 936 | 118.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 975 | 118.98 | radiation | 1 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 985 | 119.00 | radiation | 40 | 14400 | < th | dose independent | rect. | 8 | 1 |