Os05g0534600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0534600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.69 | 0.481 | 8.57 | -0.135 | 1.03 | -0.805 | 0.25 | -0.745 | -0.377 | 10.4 | 0.09469 | 6726 | -- | -- |
| 105.02 | 0.477 | 8.57 | -0.108 | 1.01 | -0.94 | 0.237 | -- | -0.373 | 10.3 | 0.1867 | 6434 | -- | -- |
| 104.94 | 0.477 | 8.57 | -0.125 | 1.02 | -0.803 | -- | -0.756 | -0.378 | 10.4 | 0.09645 | 6728 | -- | -- |
| 105.07 | 0.477 | 8.56 | -0.119 | 1.01 | -0.937 | -- | -- | -0.383 | 10.4 | 0.2328 | 6440 | -- | -- |
| 167.74 | 0.603 | 8.59 | -0.119 | -- | -0.896 | -- | -0.525 | -0.352 | -- | 0.1962 | 6231 | -- | -- |
| 125.63 | 0.525 | 8.53 | -0.352 | 1.02 | -- | 0.272 | -- | -0.254 | 10.4 | -- | -- | -- | -- |
| 125.93 | 0.526 | 8.53 | -0.341 | 1.02 | -- | -- | -- | -0.254 | 10.3 | -- | -- | -- | -- |
| 167.76 | 0.603 | 8.59 | -0.114 | -- | -0.963 | -- | -- | -0.384 | -- | 0.292 | 6440 | -- | -- |
| 105.4 | 0.478 | 8.56 | -- | 1.01 | -0.962 | -- | -- | -0.373 | 10.4 | 0.262 | 6420 | -- | -- |
| 189.65 | 0.643 | 8.56 | -0.357 | -- | -- | -- | -- | -0.257 | -- | -- | -- | -- | -- |
| 128.99 | 0.531 | 8.53 | -- | 1.02 | -- | -- | -- | -0.216 | 10.4 | -- | -- | -- | -- |
| 168.05 | 0.604 | 8.59 | -- | -- | -1 | -- | -- | -0.37 | -- | 0.3126 | 6440 | -- | -- |
| 193.02 | 0.648 | 8.55 | -- | -- | -- | -- | -- | -0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 15 |
| 2 | 106.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 3 | 106.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 15 |
| 13 | 106.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 19 |
| 15 | 106.60 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 2 | NA |
| 37 | 107.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 38 | 107.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 39 | 107.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 49 | 107.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 56 | 107.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 58 | 107.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 59 | 107.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 72 | 107.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 96 | 107.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 98 | 107.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 101 | 107.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 107 | 107.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 108 | 107.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 12 |
| 122 | 107.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 169 | 107.66 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 180 | 107.67 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 193 | 107.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 194 | 107.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 13 |
| 198 | 107.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 10 |
| 200 | 107.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 13 |
| 207 | 107.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 13 |
| 221 | 107.72 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 18 | NA |
| 222 | 107.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 226 | 107.72 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 243 | 107.74 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 18 | NA |
| 273 | 107.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 315 | 107.83 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 364 | 107.90 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 1 | NA |
| 367 | 107.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 368 | 107.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 369 | 107.90 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 1 | NA |
| 373 | 107.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 17 |
| 389 | 107.92 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 1 | NA |
| 416 | 107.95 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 450 | 107.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 490 | 108.01 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 504 | 108.02 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 594 | 108.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 21 |
| 599 | 108.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 21 |
| 697 | 108.28 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 814 | 108.46 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 836 | 108.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |