Os05g0529400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0529400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.12 | 0.342 | 7.86 | 0.421 | 0.579 | -0.864 | 0.0513 | 0.626 | 0.239 | 0.313 | 19 | 2272 | -- | -- |
| 53.64 | 0.341 | 7.84 | 0.501 | 0.573 | -1.01 | -0.0285 | -- | 0.262 | 0.354 | 18.9 | 2226 | -- | -- |
| 53.1 | 0.339 | 7.86 | 0.425 | 0.582 | -0.884 | -- | 0.616 | 0.24 | 0.346 | 18.97 | 2231 | -- | -- |
| 53.63 | 0.341 | 7.84 | 0.495 | 0.577 | -1.02 | -- | -- | 0.255 | 0.341 | 18.91 | 2226 | -- | -- |
| 73.73 | 0.4 | 7.85 | 0.41 | -- | -0.946 | -- | 0.46 | 0.227 | -- | 19 | 2350 | -- | -- |
| 70.38 | 0.393 | 7.8 | 0.953 | 0.635 | -- | -0.064 | -- | 0.449 | 0.307 | -- | -- | -- | -- |
| 70.39 | 0.393 | 7.8 | 0.955 | 0.636 | -- | -- | -- | 0.449 | 0.298 | -- | -- | -- | -- |
| 73.88 | 0.4 | 7.84 | 0.431 | -- | -1.12 | -- | -- | 0.234 | -- | 18.9 | 2352 | -- | -- |
| 55.06 | 0.346 | 7.87 | -- | 0.671 | -1.26 | -- | -- | 0.154 | 0.418 | 19 | 7105 | -- | -- |
| 95.8 | 0.457 | 7.78 | 0.976 | -- | -- | -- | -- | 0.459 | -- | -- | -- | -- | -- |
| 94.44 | 0.455 | 7.82 | -- | 0.649 | -- | -- | -- | 0.343 | 0.376 | -- | -- | -- | -- |
| 77.77 | 0.411 | 7.87 | -- | -- | -1.34 | -- | -- | 0.154 | -- | 18.9 | 2353 | -- | -- |
| 120.94 | 0.513 | 7.81 | -- | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.90 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 9 | 52.00 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 10 | 52.02 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 12 | 52.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 20 | 52.05 | humidity | 70 | 43200 | > th | dose independent | sin | 6 | NA |
| 24 | 52.05 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 39 | 52.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 53 | 52.12 | humidity | 70 | 43200 | < th | dose independent | sin | 7 | NA |
| 73 | 52.15 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 86 | 52.17 | humidity | 80 | 43200 | < th | dose dependent | rect. | 1 | 13 |
| 87 | 52.17 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 15 |
| 94 | 52.18 | humidity | 90 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 101 | 52.19 | humidity | 80 | 43200 | < th | dose dependent | sin | 5 | NA |
| 186 | 52.31 | wind | 5 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 194 | 52.33 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 207 | 52.34 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 214 | 52.35 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 217 | 52.35 | humidity | 70 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 219 | 52.35 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 243 | 52.37 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 339 | 52.46 | humidity | 80 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 357 | 52.48 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 359 | 52.48 | humidity | 80 | 43200 | < th | dose dependent | no | NA | NA |
| 361 | 52.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 362 | 52.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 397 | 52.50 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 23 |
| 402 | 52.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 408 | 52.51 | humidity | 80 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 409 | 52.52 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 444 | 52.54 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 467 | 52.55 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 489 | 52.56 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 565 | 52.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 613 | 52.63 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 629 | 52.64 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 666 | 52.66 | humidity | 70 | 43200 | > th | dose independent | sin | 16 | NA |
| 710 | 52.68 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 738 | 52.69 | humidity | 80 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 821 | 52.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 841 | 52.75 | humidity | 70 | 43200 | < th | dose independent | sin | 15 | NA |
| 910 | 52.79 | humidity | 80 | 43200 | < th | dose dependent | sin | 15 | NA |
| 972 | 52.83 | wind | 5 | 43200 | < th | dose dependent | rect. | 13 | 9 |
| 979 | 52.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 20 |