Os05g0510700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BSD domain containing protein.
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Os05g0510700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BSD domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.8 | 0.224 | 12.3 | 0.916 | 0.97 | -0.976 | 0.49 | 1.03 | 0.412 | 6.55 | 19.94 | 227 | -- | -- |
| 23.62 | 0.226 | 12.3 | 0.731 | 0.968 | -0.891 | 0.178 | -- | 0.358 | 6.2 | 19.64 | 326 | -- | -- |
| 23.28 | 0.225 | 12.3 | 0.867 | 0.963 | -0.955 | -- | 0.739 | 0.395 | 6.43 | 20.25 | 240 | -- | -- |
| 23.67 | 0.227 | 12.3 | 0.73 | 0.96 | -0.9 | -- | -- | 0.357 | 6.18 | 19.61 | 326 | -- | -- |
| 49.2 | 0.327 | 12.3 | 1.14 | -- | -1.76 | -- | 2.13 | 0.478 | -- | 24.2 | 374 | -- | -- |
| 37.07 | 0.285 | 12.3 | 0.517 | 1.29 | -- | 0.353 | -- | 0.2 | 5.97 | -- | -- | -- | -- |
| 37.36 | 0.286 | 12.3 | 0.519 | 1.29 | -- | -- | -- | 0.198 | 5.93 | -- | -- | -- | -- |
| 51.05 | 0.333 | 12.3 | 0.828 | -- | -1.58 | -- | -- | 0.388 | -- | 24.2 | 375 | -- | -- |
| 36.1 | 0.28 | 12.3 | -- | 1.03 | -0.657 | -- | -- | 0.23 | 6.1 | 22.27 | 315 | -- | -- |
| 123.61 | 0.52 | 12.4 | 0.558 | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
| 44.47 | 0.312 | 12.3 | -- | 1.3 | -- | -- | -- | 0.141 | 5.91 | -- | -- | -- | -- |
| 68.53 | 0.386 | 12.3 | -- | -- | -1.46 | -- | -- | 0.276 | -- | 24.4 | 372 | -- | -- |
| 131.81 | 0.536 | 12.4 | -- | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 14 |
| 2 | 20.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 6 | 21.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 20 | 21.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 26 | 21.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 27 | 21.84 | temperature | 10 | 720 | > th | dose dependent | sin | 2 | NA |
| 33 | 21.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 59 | 22.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 69 | 22.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 71 | 22.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 111 | 22.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 119 | 22.63 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 123 | 22.64 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 163 | 22.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 167 | 22.77 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 170 | 22.78 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 203 | 22.90 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 234 | 22.97 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 21 |
| 452 | 23.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 462 | 23.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 703 | 24.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 858 | 24.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 936 | 24.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 997 | 24.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 15 |