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Os05g0510400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.99 (0.0208) R2 : 0.771
β1 : 0.868 (0.0763) R2dD : 0.0674 R2D : 0.0663
β2 : 1.94 (0.0523) R2dC : 0.692 R2C : 0.704
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.157 (0.0445) R2dN8 : 0.00837 R2N8 : 0.00183
σ : 0.392
deviance : 69.99
__
_____
C
peak time of C : 3.42
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56 0.352 7.99 0.798 1.99 -0.666 -1.4 -0.824 0.176 3.42 79.83 1381 -- --
56.58 0.35 7.98 0.867 1.98 -0.711 -1.42 -- 0.191 3.43 79.6 1394 -- --
61.5 0.365 7.99 0.78 2.03 -0.6 -- -1.35 0.176 3.23 81 1147 -- --
62.92 0.369 7.98 0.89 1.97 -0.763 -- -- 0.201 3.44 79.45 1405 -- --
158.86 0.59 7.99 0.986 -- -1.03 -- 0.304 0.204 -- 81 1147 -- --
62.74 0.371 7.99 0.84 1.95 -- -1.52 -- 0.148 3.41 -- -- -- --
69.99 0.392 7.99 0.868 1.94 -- -- -- 0.157 3.42 -- -- -- --
138.35 0.548 7.99 1.05 -- -1.3 -- -- 0.206 -- 79 202 -- --
81.89 0.421 7.99 -- 2.02 -0.74 -- -- 0.187 3.22 85 2478 -- --
281.48 0.784 7.99 0.95 -- -- -- -- 0.208 -- -- -- -- --
89.85 0.443 8.01 -- 1.96 -- -- -- 0.0603 3.41 -- -- -- --
158.66 0.587 8.01 -- -- -1.27 -- -- 0.124 -- 82 220 -- --
305.28 0.816 8.01 -- -- -- -- -- 0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.81 wind 9.0 14400 < th dose independent rect. 9 2
2 53.84 wind 9.0 14400 < th dose independent rect. 7 4
5 54.18 humidity 80.0 1440 > th dose dependent rect. 7 4
9 54.45 wind 9.0 14400 > th dose independent rect. 6 5
11 54.51 precipitation 0.1 14400 < th dose independent rect. 14 2
12 54.51 precipitation 0.1 14400 < th dose dependent rect. 14 2
14 54.57 precipitation 0.1 14400 > th dose independent rect. 14 2
15 54.57 humidity 90.0 1440 > th dose independent rect. 5 13
16 54.57 precipitation 0.1 14400 > th dose dependent rect. 14 2
17 54.57 humidity 90.0 1440 > th dose dependent rect. 7 11
20 54.61 temperature 20.0 270 > th dose independent rect. 23 6
21 54.63 humidity 90.0 14400 > th dose independent rect. 7 1
24 54.66 humidity 80.0 1440 < th dose independent rect. 21 18
26 54.68 humidity 90.0 1440 > th dose independent rect. 7 10
27 54.69 humidity 80.0 1440 < th dose independent rect. 23 16
28 54.69 humidity 90.0 14400 > th dose dependent rect. 7 1
32 54.72 humidity 90.0 1440 > th dose independent rect. 7 7
35 54.73 humidity 90.0 1440 < th dose independent rect. 7 7
47 54.83 wind 9.0 14400 > th dose independent rect. 9 2
57 54.88 humidity 80.0 1440 > th dose independent rect. 11 2
61 54.90 humidity 90.0 1440 > th dose independent sin 1 NA
62 54.90 humidity 80.0 1440 < th dose independent rect. 11 2
65 54.91 humidity 80.0 1440 > th dose independent rect. 1 14
76 54.98 humidity 80.0 1440 > th dose independent rect. 21 18
81 55.00 humidity 90.0 14400 > th dose independent rect. 6 4
83 55.00 humidity 90.0 14400 > th dose dependent rect. 6 4
84 55.01 humidity 80.0 1440 < th dose independent sin 4 NA
87 55.01 temperature 20.0 270 > th dose independent rect. 10 19
120 55.09 humidity 90.0 14400 > th dose dependent rect. 3 19
121 55.10 humidity 80.0 1440 > th dose independent sin 4 NA
135 55.12 wind 3.0 43200 < th dose dependent rect. 4 3
138 55.13 humidity 90.0 14400 > th dose dependent rect. 15 1
173 55.21 humidity 90.0 14400 < th dose independent rect. 7 1
178 55.22 humidity 90.0 1440 > th dose independent rect. 9 5
188 55.25 humidity 90.0 1440 < th dose independent rect. 7 4
196 55.26 humidity 90.0 1440 > th dose independent rect. 7 2
202 55.27 humidity 90.0 14400 > th dose dependent rect. 9 1
205 55.27 humidity 90.0 14400 > th dose dependent rect. 6 15
210 55.28 humidity 80.0 14400 > th dose dependent rect. 13 1
219 55.29 humidity 80.0 1440 > th dose dependent sin 3 NA
223 55.30 temperature 20.0 720 < th dose independent rect. 19 5
237 55.31 humidity 90.0 14400 > th dose dependent sin 0 NA
249 55.33 humidity 90.0 1440 < th dose independent rect. 7 2
275 55.37 humidity 90.0 14400 > th dose dependent rect. 6 11
282 55.39 radiation 1.0 720 < th dose independent rect. 14 1
283 55.39 precipitation 0.1 14400 > th dose independent rect. 17 1
291 55.39 radiation 1.0 720 < th dose dependent rect. 14 1
307 55.41 wind 3.0 43200 < th dose independent rect. 5 2
323 55.43 humidity 90.0 1440 > th dose independent rect. 7 4
340 55.45 temperature 20.0 270 > th dose independent rect. 18 11
355 55.47 precipitation 0.1 14400 < th dose independent rect. 17 1
358 55.47 precipitation 0.1 14400 < th dose dependent rect. 17 1
360 55.48 wind 3.0 43200 > th dose independent rect. 5 2
379 55.50 humidity 80.0 14400 > th dose independent rect. 13 1
409 55.53 humidity 90.0 14400 < th dose independent rect. 6 3
412 55.53 precipitation 0.1 14400 > th dose independent rect. 6 11
447 55.56 precipitation 0.1 14400 < th dose independent rect. 9 7
449 55.56 precipitation 0.1 14400 < th dose independent rect. 6 11
450 55.56 precipitation 0.1 14400 < th dose dependent rect. 9 7
453 55.56 precipitation 0.1 14400 < th dose dependent rect. 6 11
487 55.61 precipitation 0.1 14400 > th dose independent rect. 9 7
494 55.61 temperature 20.0 90 > th dose independent rect. 10 22
505 55.63 temperature 20.0 720 < th dose independent rect. 21 2
511 55.63 wind 3.0 43200 < th dose dependent rect. 1 6
520 55.64 humidity 90.0 1440 > th dose dependent sin 0 NA
539 55.66 radiation 10.0 720 < th dose dependent rect. 14 14
540 55.67 humidity 90.0 14400 > th dose independent rect. 6 8
562 55.69 humidity 80.0 4320 > th dose independent rect. 23 1
571 55.70 wind 1.0 43200 > th dose dependent rect. 5 1
578 55.71 radiation 10.0 720 < th dose dependent rect. 14 7
580 55.72 humidity 80.0 14400 > th dose independent rect. 10 1
583 55.72 precipitation 0.1 1440 > th dose independent rect. 5 8
609 55.74 humidity 90.0 14400 > th dose independent rect. 3 19
614 55.74 precipitation 0.1 1440 > th dose dependent rect. 5 8
646 55.76 humidity 90.0 14400 > th dose dependent rect. 7 21
661 55.78 wind 3.0 43200 < th dose independent rect. 1 7
697 55.81 humidity 80.0 14400 < th dose independent rect. 10 1
728 55.83 precipitation 0.1 1440 > th dose independent rect. 5 6
734 55.83 humidity 90.0 14400 > th dose independent rect. 6 15
741 55.83 precipitation 0.1 14400 > th dose dependent rect. 7 9
747 55.84 precipitation 0.1 1440 > th dose dependent rect. 5 6
750 55.84 precipitation 0.1 14400 > th dose dependent rect. 6 11
756 55.85 wind 3.0 43200 > th dose independent rect. 1 7
792 55.88 radiation 10.0 720 < th dose independent rect. 14 7
840 55.91 humidity 90.0 14400 < th dose independent rect. 6 8
959 55.99 temperature 20.0 10 > th dose independent rect. 3 2
960 55.99 humidity 80.0 4320 > th dose independent rect. 21 3
963 55.99 precipitation 0.1 1440 < th dose independent rect. 1 16
971 55.99 precipitation 0.1 1440 < th dose dependent rect. 1 16
973 56.00 humidity 90.0 14400 > th dose independent sin 0 NA
989 56.00 humidity 90.0 14400 > th dose dependent rect. 12 9
993 56.00 humidity 90.0 14400 > th dose dependent rect. 15 23
1000 56.01 temperature 20.0 270 < th dose independent rect. 18 14