BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0510400 Os05g0510400|AK068685
(412 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46170.1 | chr5:18715638-18716825 REVERSE LENGTH=396 382 e-106
AT4G18380.1 | chr4:10157957-10159099 FORWARD LENGTH=381 360 e-100
AT1G30200.2 | chr1:10625147-10626286 FORWARD LENGTH=380 348 3e-96
AT1G22220.1 | chr1:7846694-7847638 FORWARD LENGTH=315 169 2e-42
AT1G78100.1 | chr1:29387907-29388911 FORWARD LENGTH=335 155 3e-38
>AT5G46170.1 | chr5:18715638-18716825 REVERSE LENGTH=396
Length = 395
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/389 (54%), Positives = 252/389 (64%), Gaps = 27/389 (6%)
Query: 33 DHFDRLPDPLLLVIFNRIGDVKALGRCSLVSRRFHDLVPLVDSVLVRVDCVIPDDXXXXX 92
DHFD LPD +LL++FN+IGDVKALGRC +VSRRFH LVP VD+V+VRVDCVI
Sbjct: 25 DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVI-------- 76
Query: 93 XXXXXXXXXXXXXXXXXXXXXVFSQIARIVLGGIVKPIQALGQILXXXXXXXXXXXXXXX 152
FS I R+V+GGIVKP+QALGQ L
Sbjct: 77 -SDDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSGSS 135
Query: 153 XXXXXXXXXXXX-XXXXGDVSHHSPSEVLRSFKELRRLRIELPAGELSMEEGVLLKWKAD 211
G V+HHSP++VL++F E+R LRIELP+GEL +++GVLLKW+A+
Sbjct: 136 SSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAE 195
Query: 212 FGSTLGSCVILXXXXXXXXXXXXXXXXXXXXE--------SDETGSIPESFYTNGGLKLR 263
FGSTL +CVIL SD+ GSIPESFYTNGGLKLR
Sbjct: 196 FGSTLDNCVILGASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLR 255
Query: 264 VVWTISSLIAASARHYLLQPIIADHTTLESLDLTDADGQGVLTMDKWQLQELRVKPVSAS 323
VVWTISSLIAASARHYLLQPIIA+H TL+SL LTD+DGQGVL M++ QL+ELRVKP++AS
Sbjct: 256 VVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAAS 315
Query: 324 GGSHRTLMPALSMRLWYAPHIELPGGLVLNGATLVAIKPTEEATRDTVGSGIAGSAGGCW 383
S RTL+PAL+MRLWYAP +ELP G VL GATLVAI+P+E + S W
Sbjct: 316 SASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPSESKKEVSDIS---------W 366
Query: 384 VSDAFEEPYRTAVGMLLKRRTYSLEMNSF 412
VS AFEEPY TA ML+KRRTY LEMNSF
Sbjct: 367 VSSAFEEPYETAAKMLVKRRTYCLEMNSF 395
>AT4G18380.1 | chr4:10157957-10159099 FORWARD LENGTH=381
Length = 380
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/382 (52%), Positives = 241/382 (63%), Gaps = 26/382 (6%)
Query: 33 DHFDRLPDPLLLVIFNRIGDVKALGRCSLVSRRFHDLVPLVDSVLVRVDCVIPDDXXXXX 92
DHFD LPD +LL+IFN IGDVKALGRCS+VS+RFH L+P V++V VRVDCVI
Sbjct: 23 DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVI-------- 74
Query: 93 XXXXXXXXXXXXXXXXXXXXXVFSQIARIVLGGIVKPIQALGQILXXXXXXXXXXXXXXX 152
FS I R+V KP+QALGQ L
Sbjct: 75 -SDDDSSSLLSDKPRSASAASPFSAIFRLVF----KPLQALGQFLKRSGSSSLPSGSSPS 129
Query: 153 XXXXXXXXXXXXXXXXGDVSHHSPSEVLRSFKELRRLRIELPAGELSMEEGVLLKWKADF 212
G V+HHSP++VL++F E++ L+IELP+GEL +++GVLLKW+A+F
Sbjct: 130 SLLISGGDDGEIEQ--GGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEF 187
Query: 213 GSTLGSCVILXXXXXX--XXXXXXXXXXXXXXESDETGSIPESFYTNGGLKLRVVWTISS 270
GSTL +CVIL ++ GSIPESFYTNGGLKLRVVWTISS
Sbjct: 188 GSTLENCVILGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISS 247
Query: 271 LIAASARHYLLQPIIADHTTLESLDLTDADGQGVLTMDKWQLQELRVKPVSASGGSHRTL 330
LIAASARHYLLQPIIA+H TL+SL LTD DGQGVL M++ QL+ELRVKP+SAS S RTL
Sbjct: 248 LIAASARHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTL 307
Query: 331 MPALSMRLWYAPHIELPGGLVLNGATLVAIKPTEEATRDTVGSGIAGSAGGCWVSDAFEE 390
+PAL+MRLWYAP +ELP G VL GATLVAI+P+E WVS AF+E
Sbjct: 308 VPALNMRLWYAPSLELPDGTVLKGATLVAIRPSESKKE---------VCDVSWVSSAFDE 358
Query: 391 PYRTAVGMLLKRRTYSLEMNSF 412
PY A ML+KRRTY LEMNSF
Sbjct: 359 PYGVAAKMLVKRRTYCLEMNSF 380
>AT1G30200.2 | chr1:10625147-10626286 FORWARD LENGTH=380
Length = 379
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/380 (52%), Positives = 240/380 (63%), Gaps = 24/380 (6%)
Query: 33 DHFDRLPDPLLLVIFNRIGDVKALGRCSLVSRRFHDLVPLVDSVLVRVDCVIPDDXXXXX 92
DHFD LPD LLL+IF+++ DVK LGRC +VSRRFH LVP V++VLVRVDCVI DD
Sbjct: 24 DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83
Query: 93 XXXXXXXXXXXXXXXXXXXXXVFSQIARIVLGGIVKPIQALGQILXXXXXXXXXXXXXXX 152
FS + R+V I KP Q LGQIL
Sbjct: 84 DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143
Query: 153 XXXXXXXXXXXXXXXXGDVSHHSPSEVLRSFKELRRLRIELPAGELSMEEGVLLKWKADF 212
V+HHSP++VL++F E+R L+IELP GEL +E+G+LLKW+ADF
Sbjct: 144 INDEIG------------VTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADF 191
Query: 213 GSTLGSCVILXXXXXXXXXXXXXXXXXXXXESDETGSIPESFYTNGGLKLRVVWTISSLI 272
GSTL +C+IL ++ G+IPESFYTNGGLKLRVVWTISSLI
Sbjct: 192 GSTLDNCMILGASSVIQSNSVKNHENSV---DEDNGNIPESFYTNGGLKLRVVWTISSLI 248
Query: 273 AASARHYLLQPIIADHTTLESLDLTDADGQGVLTMDKWQLQELRVKPVSASGGSHRTLMP 332
AASARHYLLQPII +H +L+ L L+DADGQGVL M++ QL+ELRV P+SAS S RTL+P
Sbjct: 249 AASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVP 308
Query: 333 ALSMRLWYAPHIELPGGLVLNGATLVAIKPTEEATRDTVGSGIAGSAGGCWVSDAFEEPY 392
AL+MRLWYAP ++LP G VL GATLVAI+P+E S W+SDAFEEP+
Sbjct: 309 ALNMRLWYAPELDLPDGTVLKGATLVAIRPSESKKEVCDAS---------WLSDAFEEPF 359
Query: 393 RTAVGMLLKRRTYSLEMNSF 412
T ML+KRRTY LEMNSF
Sbjct: 360 GTVAKMLIKRRTYCLEMNSF 379
>AT1G22220.1 | chr1:7846694-7847638 FORWARD LENGTH=315
Length = 314
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 187/385 (48%), Gaps = 77/385 (20%)
Query: 33 DHFDRLPDPLLLVIFNRIGDVKALGRCSLVSRRFHDLVPLVDSVLVRVDCVIPDDXXXXX 92
D FD LPDP+++ I N++GDVK L RCS +S+RF+ LVP +S+ +R+D + D
Sbjct: 2 DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSP---- 57
Query: 93 XXXXXXXXXXXXXXXXXXXXXVFSQIARIVLGGIVKPIQALGQILXXXXXXXXXXXXXXX 152
V + I R + G+V + + +
Sbjct: 58 ---------------------VVTSIFRSLFNGLVSLLSKPAKPITITT----------- 85
Query: 153 XXXXXXXXXXXXXXXXGDVSHHSPSEVLRSFKELRRLRIELPAGELSMEEGVLLKWKADF 212
+S P ++L F +R L +ELP G++ +E+G +KWKA+F
Sbjct: 86 ------------------LSPSLPFKILSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEF 127
Query: 213 GSTLGSCVILXXXXXXXXXXXXXXXXXXXXESDETGSIPESFYTNGGLKLRVVWTISSLI 272
G TL SCVI+ ESD F T GLK RVVWTIS+L+
Sbjct: 128 GKTLKSCVIVAFRSAGTVSSPVAVEG----ESDA------EFVT--GLKTRVVWTISALM 175
Query: 273 AASARHYLLQPIIADHTTLESLDLTDADGQGVLTMDKWQLQEL-----RVKPVSASGGSH 327
AAS+RHYL++ ++ +H +ESL + D + +G + M++ L+EL RV+ +
Sbjct: 176 AASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKNK 235
Query: 328 RTLMPALSMRLWYAPHIELPGGLVLNGATLVAIKPTEEATRDTVGSGIAGSAGGCWVSDA 387
R+++P++ M + +AP ++L G+ L ATLV ++P+ VG A A +V D
Sbjct: 236 RSVVPSVRMSMRHAPSLKLKSGICLESATLVIVRPS--GADFEVGDD-AELATEAFVGDC 292
Query: 388 FEEPYRTAVGMLLKRRTYSLEMNSF 412
Y AV LLK + +LEMNSF
Sbjct: 293 M---YGEAVVALLKCKKNALEMNSF 314
>AT1G78100.1 | chr1:29387907-29388911 FORWARD LENGTH=335
Length = 334
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 131/250 (52%), Gaps = 22/250 (8%)
Query: 172 SHHSPSEVLRSFKELRRLRIELPAGELSMEEGVLLKWKADFGSTLGSCVILXXXXXXXXX 231
S +P+++L F+ +R L +EL G++ +E+G +KWKA+FG TL SCVI+
Sbjct: 98 SPKTPAQILSGFERIRNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNT 157
Query: 232 XXXXXXXXXXXESDETGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIADHTTL 291
E+ S F GLK RVVWTIS+L+AAS RHYL++ ++ DH +
Sbjct: 158 SAATEAAAVVDGVVESDS---EFVC--GLKTRVVWTISALMAASTRHYLMRDLVKDHKEM 212
Query: 292 ESLDLTDADGQGVLTMDKWQLQELRVKPVSASGGS-----HRTLMPALSMRLWYAPHIEL 346
E L + D+DG+G + MD ++E R V RT++P++ M + +AP + L
Sbjct: 213 EKLIVRDSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSLML 272
Query: 347 PGGLVLNGATLVAIKPTEEATRDT----VGSGIAGSAGGCWVSDAFEEPYRTAVGMLLKR 402
G+ L ATLV ++PT A+ D V AG C Y AV LLKR
Sbjct: 273 KSGICLEAATLVVVRPTGVASDDNDVELVTEAFAGDGDDCM--------YGEAVTALLKR 324
Query: 403 RTYSLEMNSF 412
R LEMNSF
Sbjct: 325 RRNVLEMNSF 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 33 DHFDRLPDPLLLVIFNRIGDVKALGRCSLVSRRFHDLVPLVDSVLVRVDCVI 84
D FD +PDP+++ I NR+GDVK L RC VS+RF+ L +S+L+++D ++
Sbjct: 2 DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQIL 53
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,667,231
Number of extensions: 283804
Number of successful extensions: 656
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 643
Number of HSP's successfully gapped: 11
Length of query: 412
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 311
Effective length of database: 8,337,553
Effective search space: 2592978983
Effective search space used: 2592978983
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)