Os05g0494200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cysteine proteinase inhibitor-II (Oryzacystatin-II).
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Os05g0494200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cysteine proteinase inhibitor-II (Oryzacystatin-II).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.58 | 0.31 | 13.7 | 0.464 | 0.9 | -0.862 | 0.256 | -2.41 | 0.0143 | 16.5 | 9.498 | 324 | -- | -- |
| 46.82 | 0.319 | 13.6 | 0.839 | 0.89 | -0.892 | -0.306 | -- | 0.117 | 16.5 | 7.614 | 320 | -- | -- |
| 43.69 | 0.308 | 13.7 | 0.489 | 0.892 | -0.843 | -- | -2.2 | 0.0222 | 16.5 | 9.494 | 345 | -- | -- |
| 47.04 | 0.319 | 13.6 | 0.84 | 0.891 | -0.908 | -- | -- | 0.116 | 16.5 | 8.086 | 319 | -- | -- |
| 66.54 | 0.38 | 13.7 | 0.563 | -- | -0.741 | -- | -1.35 | 0.0274 | -- | 9.419 | 1175 | -- | -- |
| 55.33 | 0.349 | 13.7 | 0.648 | 0.641 | -- | -0.428 | -- | -0.0123 | 16.3 | -- | -- | -- | -- |
| 55.83 | 0.35 | 13.7 | 0.644 | 0.637 | -- | -- | -- | -0.0146 | 16.2 | -- | -- | -- | -- |
| 67.27 | 0.382 | 13.6 | 0.843 | -- | -0.63 | -- | -- | 0.104 | -- | 18.8 | 1171 | -- | -- |
| 62.56 | 0.368 | 13.7 | -- | 0.797 | -0.477 | -- | -- | -0.0163 | 16.5 | 19.67 | 350 | -- | -- |
| 77.8 | 0.412 | 13.7 | 0.618 | -- | -- | -- | -- | -0.0316 | -- | -- | -- | -- | -- |
| 66.76 | 0.382 | 13.7 | -- | 0.625 | -- | -- | -- | -0.0864 | 16.2 | -- | -- | -- | -- |
| 83.59 | 0.426 | 13.7 | -- | -- | -0.35 | -- | -- | -0.0157 | -- | 20.34 | 1170 | -- | -- |
| 87.89 | 0.438 | 13.7 | -- | -- | -- | -- | -- | -0.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 3 | 43.06 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 6 |
| 16 | 43.47 | temperature | 20 | 270 | < th | dose independent | sin | 15 | NA |
| 19 | 43.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 21 | 43.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 30 | 43.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 43 | 43.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 46 | 43.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 49 | 43.73 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 57 | 43.80 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 19 |
| 67 | 43.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 70 | 43.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 80 | 43.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 129 | 44.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 130 | 44.08 | temperature | 20 | 720 | < th | dose independent | sin | 18 | NA |
| 143 | 44.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 144 | 44.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 155 | 44.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 166 | 44.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 191 | 44.26 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 212 | 44.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 219 | 44.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 229 | 44.37 | temperature | 20 | 1440 | > th | dose independent | sin | 16 | NA |
| 236 | 44.38 | temperature | 20 | 720 | < th | dose independent | rect. | 6 | 18 |
| 244 | 44.40 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 15 |
| 290 | 44.49 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 309 | 44.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 317 | 44.54 | temperature | 20 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 322 | 44.55 | temperature | 20 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 342 | 44.60 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 21 |
| 344 | 44.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 350 | 44.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 380 | 44.69 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 22 |
| 397 | 44.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 402 | 44.73 | temperature | 20 | 90 | > th | dose independent | sin | 13 | NA |
| 404 | 44.73 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 9 |
| 409 | 44.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 573 | 44.99 | temperature | 20 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 603 | 45.03 | temperature | 20 | 270 | < th | dose dependent | sin | 16 | NA |
| 651 | 45.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 769 | 45.26 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 8 |