Os05g0488500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L34e family protein.
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Os05g0488500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L34e family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.12 | 0.305 | 9.71 | 0.0138 | 0.572 | -0.435 | -0.798 | -0.477 | -0.453 | 16 | 70.02 | 4713 | -- | -- |
| 41.47 | 0.3 | 9.73 | 0.0192 | 0.564 | -0.523 | -0.757 | -- | -0.552 | 15.8 | 74 | 6313 | -- | -- |
| 43.15 | 0.306 | 9.72 | 0.0208 | 0.563 | -0.463 | -- | -0.303 | -0.484 | 15.8 | 71 | 6352 | -- | -- |
| 43.08 | 0.306 | 9.73 | 0.0109 | 0.551 | -0.542 | -- | -- | -0.559 | 15.8 | 73.95 | 6302 | -- | -- |
| 59.71 | 0.36 | 9.73 | 0.0069 | -- | -0.693 | -- | -0.0924 | -0.54 | -- | 71.81 | 6291 | -- | -- |
| 45.89 | 0.318 | 9.7 | -0.0155 | 0.613 | -- | -0.812 | -- | -0.402 | 16 | -- | -- | -- | -- |
| 47.78 | 0.324 | 9.7 | -0.0253 | 0.608 | -- | -- | -- | -0.406 | 16 | -- | -- | -- | -- |
| 58.09 | 0.357 | 9.7 | -0.075 | -- | -0.311 | -- | -- | -0.425 | -- | 73.95 | 6302 | -- | -- |
| 43.08 | 0.306 | 9.74 | -- | 0.552 | -0.543 | -- | -- | -0.563 | 15.8 | 74 | 6302 | -- | -- |
| 67.9 | 0.385 | 9.7 | -0.05 | -- | -- | -- | -- | -0.422 | -- | -- | -- | -- | -- |
| 47.79 | 0.323 | 9.7 | -- | 0.608 | -- | -- | -- | -0.403 | 16 | -- | -- | -- | -- |
| 58.24 | 0.357 | 9.7 | -- | -- | -0.31 | -- | -- | -0.417 | -- | 73.95 | 6302 | -- | -- |
| 67.97 | 0.385 | 9.7 | -- | -- | -- | -- | -- | -0.417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.03 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 2 | 40.46 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 3 | 40.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 4 | 40.59 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 6 | 40.61 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 9 | 40.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 16 | 40.82 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 29 | 40.96 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 39 | 41.06 | wind | 1.0 | 720 | > th | dose independent | rect. | 10 | 15 |
| 46 | 41.08 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 58 | 41.16 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 83 | 41.26 | wind | 3.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 98 | 41.31 | wind | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 103 | 41.32 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 114 | 41.35 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 117 | 41.35 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 123 | 41.38 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 140 | 41.41 | wind | 1.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 148 | 41.42 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 165 | 41.46 | wind | 3.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 168 | 41.46 | humidity | 90.0 | 10 | < th | dose independent | rect. | 23 | 10 |
| 193 | 41.51 | wind | 1.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 194 | 41.51 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 195 | 41.51 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 201 | 41.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 8 |
| 239 | 41.57 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 10 | 3 |
| 250 | 41.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 259 | 41.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 266 | 41.62 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 19 | 17 |
| 285 | 41.65 | humidity | 60.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 290 | 41.65 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 10 | 5 |
| 291 | 41.66 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 297 | 41.67 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 302 | 41.67 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 23 | 13 |
| 325 | 41.69 | atmosphere | 1010.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 326 | 41.69 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 331 | 41.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 337 | 41.70 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 344 | 41.71 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 352 | 41.72 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 19 | 20 |
| 368 | 41.73 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 19 | 18 |
| 374 | 41.74 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 401 | 41.76 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 2 |
| 406 | 41.76 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 409 | 41.77 | wind | 1.0 | 720 | > th | dose independent | rect. | 13 | 12 |
| 410 | 41.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 412 | 41.77 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 413 | 41.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 414 | 41.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 416 | 41.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 422 | 41.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 426 | 41.78 | wind | 1.0 | 720 | < th | dose independent | rect. | 10 | 15 |
| 430 | 41.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 439 | 41.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 441 | 41.80 | atmosphere | 1010.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 452 | 41.80 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 492 | 41.84 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 512 | 41.85 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 15 |
| 539 | 41.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 542 | 41.88 | humidity | 60.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 547 | 41.88 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 576 | 41.90 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 594 | 41.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 595 | 41.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 603 | 41.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 605 | 41.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 20 |
| 613 | 41.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 19 |
| 626 | 41.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 629 | 41.92 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 630 | 41.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 632 | 41.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 15 |
| 641 | 41.92 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 8 |
| 648 | 41.93 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 675 | 41.93 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 687 | 41.94 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 753 | 41.97 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 754 | 41.97 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 763 | 41.97 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 770 | 41.98 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 791 | 41.98 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 792 | 41.98 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 795 | 41.98 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 813 | 41.99 | wind | 1.0 | 720 | < th | dose independent | rect. | 12 | 13 |
| 887 | 42.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 905 | 42.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 910 | 42.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 931 | 42.01 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 942 | 42.02 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 966 | 42.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 982 | 42.04 | humidity | 50.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 1000 | 42.04 | wind | 1.0 | 14400 | < th | dose dependent | sin | 8 | NA |