Os05g0481400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os05g0481400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.71 | 0.325 | 8.06 | -1.19 | 0.644 | -2.83 | -0.812 | -5.15 | -0.156 | 7.23 | 18.8 | 4513 | -- | -- |
| 56.68 | 0.353 | 8.15 | -0.903 | 0.659 | -0.231 | -0.783 | -- | -0.0703 | 7.13 | 18.8 | 4513 | -- | -- |
| 49.25 | 0.327 | 8.07 | -1.21 | 0.65 | -2.86 | -- | -5.16 | -0.151 | 6.91 | 18.7 | 4530 | -- | -- |
| 53.31 | 0.34 | 8.16 | -1.04 | 0.656 | -0.45 | -- | -- | -0.156 | 7.13 | 34.55 | 5505 | -- | -- |
| 70.89 | 0.392 | 8.08 | -1.2 | -- | -2.95 | -- | -5.35 | -0.15 | -- | 18.7 | 4286 | -- | -- |
| 56.91 | 0.354 | 8.15 | -0.875 | 0.659 | -- | -0.805 | -- | -0.0619 | 7.18 | -- | -- | -- | -- |
| 58.45 | 0.358 | 8.15 | -0.893 | 0.663 | -- | -- | -- | -0.0613 | 6.86 | -- | -- | -- | -- |
| 75.29 | 0.404 | 8.2 | -1.09 | -- | -0.534 | -- | -- | -0.16 | -- | 103.6 | 4296 | -- | -- |
| 79.39 | 0.417 | 8.12 | -- | 0.644 | 0.0931 | -- | -- | 0.0492 | 7.08 | 41.01 | 1954 | -- | -- |
| 81.47 | 0.422 | 8.16 | -0.879 | -- | -- | -- | -- | -0.0487 | -- | -- | -- | -- | -- |
| 79.48 | 0.417 | 8.13 | -- | 0.653 | -- | -- | -- | 0.0382 | 6.94 | -- | -- | -- | -- |
| 94.62 | 0.453 | 8.12 | -- | -- | 0.444 | -- | -- | 0.156 | -- | 22.2 | 47520 | -- | -- |
| 101.86 | 0.471 | 8.14 | -- | -- | -- | -- | -- | 0.0489 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 2 | 46.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 3 | 46.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 4 | 46.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 5 | 46.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 6 | 46.52 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 10 | 46.64 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 11 | 46.67 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 17 | 46.72 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 18 | 46.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 22 | 46.77 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 27 | 46.81 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 44 | 46.85 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 46 | 46.85 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 47 | 46.86 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 63 | 46.90 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 74 | 46.92 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 76 | 46.93 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 77 | 46.93 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 83 | 46.94 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 96 | 46.97 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 123 | 47.00 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 138 | 47.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 139 | 47.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 140 | 47.04 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 142 | 47.07 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 146 | 47.08 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 166 | 47.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 175 | 47.15 | wind | 1.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 176 | 47.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 177 | 47.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 178 | 47.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 179 | 47.16 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 180 | 47.16 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 181 | 47.16 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 185 | 47.18 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 188 | 47.20 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 198 | 47.24 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 200 | 47.25 | wind | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 203 | 47.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 206 | 47.26 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 223 | 47.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 226 | 47.28 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 227 | 47.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 229 | 47.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 230 | 47.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 238 | 47.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 241 | 47.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 247 | 47.35 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 253 | 47.36 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 275 | 47.38 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 308 | 47.41 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 315 | 47.42 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 323 | 47.42 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 326 | 47.42 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 334 | 47.43 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 340 | 47.44 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 374 | 47.47 | wind | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 406 | 47.51 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 407 | 47.51 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 415 | 47.52 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 416 | 47.52 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 417 | 47.52 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 436 | 47.56 | radiation | 10.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 444 | 47.56 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 445 | 47.56 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 460 | 47.56 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 463 | 47.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 20 |
| 514 | 47.58 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 518 | 47.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 541 | 47.60 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 543 | 47.60 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 566 | 47.61 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 567 | 47.61 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 590 | 47.62 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 631 | 47.64 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 632 | 47.64 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 641 | 47.65 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 648 | 47.65 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 657 | 47.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 665 | 47.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 666 | 47.67 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 667 | 47.67 | wind | 5.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 683 | 47.68 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 690 | 47.68 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 762 | 47.70 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 772 | 47.70 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 15 | 16 |
| 780 | 47.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 797 | 47.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 801 | 47.72 | radiation | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 825 | 47.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 16 |
| 826 | 47.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 828 | 47.72 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 871 | 47.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 899 | 47.74 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 10 | 21 |
| 901 | 47.75 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 918 | 47.76 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 952 | 47.76 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 961 | 47.77 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 969 | 47.77 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 986 | 47.78 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 8 | NA |