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Os05g0481000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : GCN5-related N-acetyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0156) R2 : 0.503
β1 : -0.927 (0.0573) R2dD : 0.296 R2D : 0.0834
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.566 (0.0334) R2dN8 : 0.42 R2N8 : 0.207
σ : 0.294
deviance : 39.5
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.24 0.271 12 -0.896 0.16 0.0535 -0.427 2.41 -0.554 19.4 1005 14 -- --
33.65 0.272 12 -0.993 0.16 0.549 -0.467 -- -0.534 19.7 1003 3 -- --
33.64 0.27 12 -0.883 0.167 0.033 -- 2.51 -0.556 18.5 1005 12 -- --
34.15 0.274 12 -0.979 0.17 0.544 -- -- -0.535 18.7 1003 3 -- --
35.09 0.276 12 -0.887 -- 0.0544 -- 2.44 -0.556 -- 1005 10 -- --
37.49 0.287 12 -0.935 0.167 -- -0.434 -- -0.563 19.5 -- -- -- --
37.89 0.288 12 -0.923 0.176 -- -- -- -0.562 18.5 -- -- -- --
35.49 0.277 12 -0.99 -- 0.549 -- -- -0.537 -- 1003 677 -- --
58.84 0.357 12 -- 0.181 0.345 -- -- -0.432 18.3 1003 2 -- --
39.5 0.294 12 -0.927 -- -- -- -- -0.566 -- -- -- -- --
60.32 0.363 12 -- 0.189 -- -- -- -0.46 18.2 -- -- -- --
60.4 0.362 12 -- -- 0.338 -- -- -0.435 -- 1004 677 -- --
62.17 0.368 12 -- -- -- -- -- -0.463 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.63 atmosphere 1000.0 270 > th dose independent rect. 10 21
3 30.97 atmosphere 1000.0 270 > th dose independent rect. 11 19
7 31.14 atmosphere 1000.0 10 > th dose independent rect. 12 20
9 31.27 atmosphere 1000.0 90 > th dose independent rect. 13 18
23 31.79 atmosphere 1000.0 30 > th dose independent rect. 5 23
26 31.88 atmosphere 1000.0 10 > th dose independent rect. 15 17
41 32.09 temperature 20.0 90 > th dose independent rect. 1 6
42 32.12 radiation 20.0 1440 < th dose independent rect. 11 3
43 32.17 temperature 20.0 10 > th dose independent rect. 1 6
51 32.32 temperature 20.0 270 > th dose independent rect. 1 4
53 32.34 wind 1.0 270 > th dose independent rect. 4 1
57 32.36 atmosphere 1000.0 270 > th dose independent rect. 1 15
75 32.52 radiation 10.0 270 > th dose independent sin 9 NA
76 32.52 humidity 80.0 4320 > th dose independent rect. 21 2
84 32.56 radiation 20.0 1440 < th dose dependent rect. 8 6
88 32.57 wind 1.0 270 > th dose dependent rect. 3 2
90 32.60 wind 1.0 90 > th dose independent rect. 4 3
92 32.63 radiation 10.0 90 > th dose independent sin 5 NA
98 32.66 atmosphere 1000.0 720 > th dose independent rect. 17 21
106 32.70 radiation 10.0 270 > th dose independent rect. 6 4
125 32.72 radiation 10.0 270 > th dose independent rect. 7 2
127 32.73 humidity 90.0 270 < th dose independent rect. 7 2
128 32.73 radiation 20.0 1440 > th dose independent rect. 11 3
129 32.73 wind 1.0 43200 > th dose independent rect. 2 5
133 32.74 atmosphere 995.0 10 > th dose dependent rect. 12 20
135 32.76 radiation 10.0 1440 > th dose independent rect. 8 6
137 32.76 radiation 20.0 90 < th dose dependent sin 5 NA
143 32.78 wind 1.0 43200 < th dose independent rect. 2 5
153 32.81 radiation 30.0 1440 < th dose dependent rect. 11 3
172 32.83 radiation 20.0 10 < th dose dependent sin 4 NA
173 32.83 wind 1.0 43200 < th dose dependent rect. 2 5
176 32.84 radiation 20.0 90 < th dose dependent sin 2 NA
195 32.88 atmosphere 1000.0 270 > th dose independent rect. 22 23
198 32.88 radiation 40.0 10 < th dose dependent rect. 12 20
199 32.89 humidity 70.0 1440 > th dose independent rect. 12 1
203 32.89 atmosphere 1000.0 720 > th dose independent rect. 17 14
204 32.89 radiation 1.0 270 > th dose dependent sin 10 NA
211 32.91 humidity 80.0 4320 < th dose independent rect. 21 2
216 32.91 atmosphere 995.0 270 > th dose dependent rect. 10 21
220 32.92 temperature 15.0 270 > th dose dependent rect. 7 2
227 32.93 atmosphere 1005.0 90 > th dose dependent rect. 3 4
228 32.93 temperature 25.0 90 > th dose dependent rect. 21 14
229 32.94 humidity 70.0 1440 > th dose independent rect. 11 3
233 32.94 atmosphere 1005.0 270 > th dose dependent rect. 3 2
237 32.95 humidity 80.0 10 > th dose independent sin 6 NA
266 32.97 atmosphere 1000.0 10 > th dose independent rect. 17 15
273 32.98 temperature 25.0 90 > th dose dependent sin 8 NA
280 33.00 atmosphere 1000.0 90 > th dose independent rect. 17 14
283 33.00 radiation 10.0 1440 < th dose dependent rect. 7 10
285 33.01 radiation 10.0 10 > th dose independent sin 5 NA
286 33.01 humidity 70.0 1440 < th dose independent rect. 12 1
293 33.01 radiation 20.0 270 < th dose dependent rect. 1 13
304 33.03 temperature 20.0 10 > th dose independent rect. 3 4
309 33.03 wind 1.0 90 > th dose dependent rect. 3 4
316 33.04 radiation 1.0 90 > th dose dependent sin 7 NA
336 33.05 humidity 90.0 90 < th dose dependent rect. 22 13
337 33.05 radiation 20.0 90 < th dose dependent rect. 3 14
344 33.06 radiation 20.0 270 < th dose dependent sin 9 NA
348 33.07 precipitation 0.1 270 > th dose independent rect. 2 2
363 33.09 temperature 25.0 90 > th dose independent rect. 7 4
370 33.10 atmosphere 1000.0 720 > th dose independent rect. 9 14
392 33.13 atmosphere 1000.0 30 > th dose independent rect. 7 23
405 33.14 humidity 90.0 270 < th dose independent rect. 3 8
406 33.14 radiation 1.0 270 < th dose independent rect. 3 12
418 33.15 humidity 70.0 30 > th dose dependent sin 6 NA
419 33.15 humidity 60.0 720 > th dose dependent rect. 19 2
432 33.16 radiation 10.0 90 < th dose independent sin 3 NA
443 33.16 atmosphere 995.0 30 > th dose dependent rect. 15 17
452 33.17 precipitation 0.1 270 > th dose dependent rect. 2 2
457 33.17 radiation 20.0 10 < th dose dependent rect. 4 12
465 33.18 radiation 10.0 90 < th dose independent rect. 3 14
469 33.18 temperature 20.0 90 > th dose dependent rect. 7 6
474 33.18 atmosphere 1005.0 90 < th dose dependent rect. 17 22
495 33.20 atmosphere 1000.0 720 > th dose independent rect. 19 10
500 33.20 radiation 1.0 270 > th dose dependent rect. 5 5
517 33.20 atmosphere 1005.0 10 < th dose dependent rect. 17 23
526 33.21 atmosphere 1005.0 10 < th dose dependent rect. 13 23
537 33.22 atmosphere 1005.0 10 < th dose dependent rect. 1 23
538 33.22 atmosphere 1005.0 90 < th dose dependent rect. 15 23
551 33.23 atmosphere 1005.0 10 < th dose dependent rect. 19 23
556 33.24 atmosphere 1005.0 10 < th dose dependent no NA NA
568 33.24 atmosphere 1005.0 90 < th dose dependent rect. 11 23
573 33.24 atmosphere 1005.0 10 < th dose dependent rect. 21 23
577 33.25 radiation 1.0 270 < th dose independent rect. 3 6
583 33.25 wind 1.0 10 > th dose dependent rect. 4 3
585 33.25 radiation 20.0 10 < th dose dependent rect. 4 10
587 33.25 atmosphere 1005.0 10 < th dose dependent rect. 5 23
589 33.25 atmosphere 1005.0 10 < th dose dependent rect. 7 23
591 33.25 atmosphere 1005.0 10 < th dose dependent rect. 9 23
594 33.25 atmosphere 1005.0 10 < th dose dependent rect. 23 23
599 33.26 temperature 20.0 90 > th dose independent rect. 12 19
602 33.26 atmosphere 1000.0 720 > th dose independent rect. 1 22
606 33.26 temperature 15.0 90 > th dose dependent rect. 1 6
613 33.26 atmosphere 1005.0 30 < th dose dependent rect. 3 23
622 33.27 humidity 80.0 1440 < th dose independent rect. 9 6
623 33.27 radiation 10.0 90 > th dose independent rect. 7 7
659 33.29 atmosphere 1000.0 10 > th dose independent rect. 13 23
697 33.30 radiation 30.0 10 < th dose independent rect. 12 20
702 33.30 temperature 15.0 10 > th dose dependent rect. 1 6
716 33.31 temperature 25.0 30 > th dose independent rect. 7 8
728 33.32 atmosphere 1000.0 270 > th dose independent rect. 3 2
733 33.32 atmosphere 1000.0 720 > th dose independent rect. 17 6
735 33.32 humidity 80.0 1440 > th dose independent rect. 8 8
743 33.32 radiation 20.0 1440 < th dose dependent sin 23 NA
753 33.33 humidity 80.0 1440 > th dose independent rect. 9 6
780 33.34 atmosphere 1005.0 90 < th dose dependent rect. 19 20
784 33.35 wind 1.0 14400 < th dose independent rect. 2 1
789 33.35 atmosphere 1000.0 720 > th dose independent rect. 19 12
794 33.35 temperature 20.0 10 > th dose dependent rect. 7 5
813 33.36 temperature 15.0 270 > th dose dependent rect. 1 4
841 33.38 wind 3.0 14400 < th dose independent rect. 13 2
844 33.38 radiation 20.0 1440 < th dose independent rect. 5 9
874 33.39 humidity 80.0 10 < th dose independent sin 5 NA
875 33.39 atmosphere 1000.0 720 > th dose independent sin 17 NA
892 33.39 radiation 20.0 1440 < th dose independent rect. 9 18
895 33.39 radiation 20.0 1440 < th dose independent rect. 9 20
900 33.39 atmosphere 1000.0 10 > th dose independent rect. 1 23
917 33.40 wind 3.0 14400 > th dose independent rect. 12 3
963 33.41 wind 1.0 14400 > th dose independent rect. 2 1
973 33.41 atmosphere 1000.0 90 > th dose independent rect. 19 12
980 33.41 atmosphere 1000.0 90 < th dose independent rect. 15 23
982 33.41 atmosphere 1005.0 10 < th dose dependent sin 6 NA