BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0481000 Os05g0481000|AK059369
         (254 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0481000  GCN5-related N-acetyltransferase domain contai...   436   e-122
Os08g0102000  GCN5-related N-acetyltransferase domain contai...   101   5e-22

>Os05g0481000 GCN5-related N-acetyltransferase domain containing protein
          Length = 254

 Score =  436 bits (1120), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/237 (89%), Positives = 213/237 (89%)

Query: 18  FRCVPTASCGLGARGKAPAPRRLLHDHAQGKKRAAATWSLKAGLWDSLRSGFLKSNNSTE 77
           FRCVPTASCGLGARGKAPAPRRLLHDHAQGKKRAAATWSLKAGLWDSLRSGFLKSNNSTE
Sbjct: 18  FRCVPTASCGLGARGKAPAPRRLLHDHAQGKKRAAATWSLKAGLWDSLRSGFLKSNNSTE 77

Query: 78  TVXXXXXXXXXXXXXXXXXXXXXXXXADGSTEQIIFSSAGDVNVYDLQALCDKVGWPRRP 137
           TV                        ADGSTEQIIFSSAGDVNVYDLQALCDKVGWPRRP
Sbjct: 78  TVEPPSAPIEEEEPLPEELVLLERTLADGSTEQIIFSSAGDVNVYDLQALCDKVGWPRRP 137

Query: 138 LTKIAASLRNSYLVATLHSVTMPSKAEGEERKQLIGMARATSDHAFNATIWDVLVDPSYQ 197
           LTKIAASLRNSYLVATLHSVTMPSKAEGEERKQLIGMARATSDHAFNATIWDVLVDPSYQ
Sbjct: 138 LTKIAASLRNSYLVATLHSVTMPSKAEGEERKQLIGMARATSDHAFNATIWDVLVDPSYQ 197

Query: 198 GQGLGKALMEKVIRTLLQRDISNITLFADNKVVDFYKNLGFEADPQGIKGMFWYPRF 254
           GQGLGKALMEKVIRTLLQRDISNITLFADNKVVDFYKNLGFEADPQGIKGMFWYPRF
Sbjct: 198 GQGLGKALMEKVIRTLLQRDISNITLFADNKVVDFYKNLGFEADPQGIKGMFWYPRF 254



>Os08g0102000 GCN5-related N-acetyltransferase domain containing protein
          Length = 200

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 7/137 (5%)

Query: 115 SAGDVNVYDLQALCDKVGWPRRPLTKIAASLRNSYLVATLHSVTMPSKAEGEERKQLIGM 174
           S+  ++V  L  +  +VG+PRR   ++  +L +S +V    S    S + G      +  
Sbjct: 60  SSTGLDVGALNEVFARVGFPRRQEERLRRALEHSEVVWLEDSA---SSSAGRP----VAF 112

Query: 175 ARATSDHAFNATIWDVLVDPSYQGQGLGKALMEKVIRTLLQRDISNITLFADNKVVDFYK 234
           ARA  D  FNA +WDV+V+PS QG GLG+A+ME+++  L  + +SNI L+A+ +VV FY+
Sbjct: 113 ARAAGDGVFNAVVWDVVVEPSCQGLGLGRAVMERLVADLRGKGVSNIALYAEPRVVGFYR 172

Query: 235 NLGFEADPQGIKGMFWY 251
            LGF  DP  I+GM +Y
Sbjct: 173 LLGFAMDPDAIRGMAFY 189



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,140,028
Number of extensions: 247733
Number of successful extensions: 603
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 601
Number of HSP's successfully gapped: 2
Length of query: 254
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 155
Effective length of database: 11,866,615
Effective search space: 1839325325
Effective search space used: 1839325325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)